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  5. GSVIVT01026649001

GSVIVT01026649001


Description : RNA biosynthesis.transcriptional activation.NIN-like superfamily.RKD transcription factor


Gene families : OG0000385 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000385_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01026649001
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
Adi_g058551 No alias germ cell differentiation factor *(RKD) & original... 0.02 OrthoFinder output from all 47 species
Dcu_g51554 No alias germ cell differentiation factor *(RKD) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g19340 No alias germ cell differentiation factor *(RKD) & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01038562001 No alias RNA biosynthesis.transcriptional activation.NIN-like... 0.03 OrthoFinder output from all 47 species
Len_g30346 No alias RKD-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Smo73105 No alias RNA biosynthesis.transcriptional activation.NIN-like... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009143 nucleoside triphosphate catabolic process IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046434 organophosphate catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
MF GO:0047429 nucleoside triphosphate diphosphatase activity IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:1901292 nucleoside phosphate catabolic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003035 RWP-RK_dom 14 61
No external refs found!