1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os12g17910

LOC_Os12g17910 (Os12g0277500)


Aliases : Os12g0277500

Description : 1.3.13 PS.calvin cycle.rubisco interacting Encodes chaperonin-60 alpha, a molecular chaperone involved in Rubisco folding. Mutants display aberrant chloroplast and embryo development. chaperonin-60alpha (CPN60A)


Gene families : OG_01_0000305 (Gene family) Phylogenetic Tree(s): OG0000305_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os12g17910
Cluster HCCA cluster: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AT1G26230 No alias TCP-1/cpn60 chaperonin family protein 0.03 Gene family
AT1G55490 CPN60B, LEN1 chaperonin 60 beta 0.1 Gene family
AT2G28000 CH-CPN60A, CPN60A, SLP chaperonin-60alpha 0.03 Gene family
AT5G18820 EMB3007 TCP-1/cpn60 chaperonin family protein 0.02 Gene family
Cre04.g231222 No alias 1.3.13 PS.calvin cycle.rubisco interacting Encodes... 0.05 Gene family
Cre07.g339150 No alias 29.6 protein.folding TCP-1/cpn60 chaperonin family protein 0.05 Gene family
Cre17.g741450 No alias 1.3.13 PS.calvin cycle.rubisco interacting encodes the... 0.06 Gene family
GSVIVT01025490001 No alias 29.6 protein.folding TCP-1/cpn60 chaperonin family protein 0.03 Gene family
GSVIVT01031526001 No alias 1.3.13 PS.calvin cycle.rubisco interacting Encodes... 0.01 Gene family
MA_97627g0010 No alias 29.6 protein.folding TCP-1/cpn60 chaperonin family protein 0.02 Gene family
Smo165043 PACid_15410433 No description available 0.02 Gene family
Smo168153 PACid_15419933 No description available 0.03 Gene family
Solyc01g028810.3.1 Solyc01g028810.3 29.6 protein.folding TCP-1/cpn60 chaperonin family protein 0.04 Gene family
Solyc02g068730.3.1 Solyc02g068730.3 29.6 protein.folding embryo defective 3007 (EMB3007) 0.03 Gene family
Solyc03g120850.3.1 Solyc03g120850.3 No description available 0.09 Gene family
Solyc03g121640.3.1 Solyc03g121640.3 29.6 protein.folding heat shock protein 60-3A (HSP60-3A) 0.02 Gene family
Solyc11g069790.2.1 Solyc11g069790.2 1.3.13 PS.calvin cycle.rubisco interacting Encodes... 0.07 Gene family
Zm00001d000399 No alias 1.3.13 PS.calvin cycle.rubisco interacting Encodes... 0.06 Gene family
Zm00001d028409 GRMZM2G042253 29.6 protein.folding TCP-1/cpn60 chaperonin family protein 0.04 Gene family
Zm00001d035937 GRMZM2G095252,... No description available 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002423 Cpn60/TCP-1 59 562
No external refs found!