GSVIVT01026540001


Description : COMPASS-like H3K4 histone methylase component WDR5A OS=Arabidopsis thaliana


Gene families : OG0001278 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001278_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01026540001
Cluster HCCA: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
AT3G15470 No alias Transducin/WD40 repeat-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G54200 No alias Transducin/WD40 repeat-like superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g036566 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g20407 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g06072 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os04g48010.2 LOC_Os04g48010 COMPASS-like H3K4 histone methylase component WDR5A... 0.04 OrthoFinder output from all 47 species
Solyc11g005710.2.1 Solyc11g005710 COMPASS-like H3K4 histone methylase component WDR5A... 0.03 OrthoFinder output from all 47 species
Tin_g30658 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000107_P001 Zm00001e000107 COMPASS-like H3K4 histone methylase component WDR5A... 0.02 OrthoFinder output from all 47 species
Zm00001e006528_P001 Zm00001e006528 COMPASS-like H3K4 histone methylase component WDR5B... 0.09 OrthoFinder output from all 47 species
Zm00001e041942_P002 Zm00001e041942 COMPASS-like H3K4 histone methylase component WDR5B... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 303 338
IPR001680 WD40_repeat 344 380
IPR001680 WD40_repeat 233 264
No external refs found!