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  5. GSVIVT01026512001

GSVIVT01026512001 (NFB01, NFB1, MUB3.9, FAS2)


Aliases : NFB01, NFB1, MUB3.9, FAS2

Description : Chromatin organisation.histone chaperone activities.CAF1 histone chaperone complex.CAF1b/FAS2 component


Gene families : OG0006619 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006619_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01026512001

Target Alias Description ECC score Gene Family Method Actions
AT5G64630 NFB01, NFB1, MUB3.9, FAS2 Transducin/WD40 repeat-like superfamily protein 0.1 OrthoFinder output from all 47 species
Ceric.12G028700.1 NFB01, NFB1,... component *(CAF1b/FAS2) of CAF1 histone chaperone... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020629.12 NFB01, NFB1, MUB3.9, FAS2 Chromatin assembly factor 1 subunit FAS2 homolog... 0.02 OrthoFinder output from all 47 species
Dac_g43644 NFB01, NFB1, MUB3.9, FAS2 component *(CAF1b/FAS2) of CAF1 histone chaperone... 0.02 OrthoFinder output from all 47 species
Gb_06025 NFB01, NFB1, MUB3.9, FAS2 component CAF1b/FAS2 of CAF1 histone chaperone complex 0.04 OrthoFinder output from all 47 species
MA_6422g0020 NFB01, NFB1, MUB3.9, FAS2 component CAF1b/FAS2 of CAF1 histone chaperone complex 0.04 OrthoFinder output from all 47 species
Mp4g02980.1 NFB01, NFB1, MUB3.9, FAS2 component CAF1b/FAS2 of CAF1 histone chaperone complex 0.07 OrthoFinder output from all 47 species
Nbi_g23632 NFB01, NFB1, MUB3.9, FAS2 component *(CAF1b/FAS2) of CAF1 histone chaperone... 0.04 OrthoFinder output from all 47 species
Zm00001e029144_P001 NFB01, NFB1,... component CAF1b/FAS2 of CAF1 histone chaperone complex 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003896 DNA primase activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006269 DNA replication, synthesis of RNA primer IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 11 40
IPR001680 WD40_repeat 57 92
IPR001680 WD40_repeat 148 181
IPR001680 WD40_repeat 102 140
IPR011659 PD40 343 362
No external refs found!