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  5. GSVIVT01026504001

GSVIVT01026504001 (Y14)


Aliases : Y14

Description : RNA processing.RNA quality control Exon Junction complex (EJC).core components.Y14 component


Gene families : OG0003013 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003013_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01026504001

Target Alias Description ECC score Gene Family Method Actions
Als_g23384 Y14 component *(Y14) of RNA quality control Exon Junction... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021351.15 Y14 RNA processing.RNA quality control Exon Junction complex... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021352.5 Y14 RNA processing.RNA quality control Exon Junction complex... 0.02 OrthoFinder output from all 47 species
Cre12.g526750 Y14 RNA processing.RNA quality control Exon Junction complex... 0.01 OrthoFinder output from all 47 species
LOC_Os05g04850.1 Y14, LOC_Os05g04850 component Y14 of RNA quality control Exon Junction complex 0.04 OrthoFinder output from all 47 species
Mp5g04230.1 Y14 component Y14 of RNA quality control Exon Junction complex 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
CC GO:0035145 exon-exon junction complex IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 100 169
No external refs found!