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  5. GSVIVT01026453001

GSVIVT01026453001 (GA5, GA20OX1,...)


Aliases : GA5, GA20OX1, ATGA20OX1, AT2301

Description : Phytohormones.gibberellin.synthesis.gibberellin 20-oxidase


Gene families : OG0003609 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003609_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01026453001

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01026466001 ATGA20OX2,... Phytohormones.gibberellin.synthesis.gibberellin 20-oxidase 0.07 OrthoFinder output from all 47 species
Gb_19227 GA5, GA20OX1,... gibberellin 20-oxidase 0.04 OrthoFinder output from all 47 species
LOC_Os05g34854.1 GA5, GA20OX1,... gibberellin 20-oxidase 0.04 OrthoFinder output from all 47 species
Len_g30410 ATGA20OX2,... EC_1.14 oxidoreductase acting on paired donor with... 0.02 OrthoFinder output from all 47 species
Ore_g27731 GA5, GA20OX1,... EC_1.14 oxidoreductase acting on paired donor with... 0.04 OrthoFinder output from all 47 species
Ore_g27736 GA5, GA20OX1,... EC_1.14 oxidoreductase acting on paired donor with... 0.02 OrthoFinder output from all 47 species
Smo115673 ATGA20OX3,... Gibberellin 20 oxidase 1-D OS=Triticum aestivum 0.02 OrthoFinder output from all 47 species
Solyc11g072310.2.1 GA5, GA20OX1,... gibberellin 20-oxidase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP HCCA
MF GO:0015267 channel activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0030976 thiamine pyrophosphate binding IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0050997 quaternary ammonium group binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR026992 DIOX_N 59 157
IPR005123 Oxoglu/Fe-dep_dioxygenase 224 320
No external refs found!