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  5. GSVIVT01026448001

GSVIVT01026448001


Description : RNA biosynthesis.RNA polymerase I-dependent transcription.TFIa/RRN3 basal transcription factor


Gene families : OG0004620 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004620_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01026448001

Target Alias Description ECC score Gene Family Method Actions
Dde_g13092 No alias basal transcription factor *(TFIa/RRN3) & original... 0.02 OrthoFinder output from all 47 species
LOC_Os06g47350.2 LOC_Os06g47350 basal transcription factor (TFIa/RRN3) 0.07 OrthoFinder output from all 47 species
Solyc02g082340.3.1 Solyc02g082340 basal transcription factor (TFIa/RRN3) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR007991 RNA_pol_I_trans_ini_fac_RRN3 19 541
No external refs found!