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  5. GSVIVT01026268001

GSVIVT01026268001 (AGO2)


Aliases : AGO2

Description : Chromatin organisation.DNA methylation.canonical RNA-directed DNA methylation pathway.AGO siRNA-integrating factor


Gene families : OG0000157 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000157_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: GSVIVT01026268001

Target Alias Description ECC score Gene Family Method Actions
AT5G43810 PNH, AGO10, ZLL Stabilizer of iron transporter SufD / Polynucleotidyl transferase 0.03 OrthoFinder output from all 47 species
Adi_g098476 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g110306 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.03 OrthoFinder output from all 47 species
Aev_g06124 AGO4, OCP11 siRNA-integrating factor *(AGO) & original description: none 0.01 OrthoFinder output from all 47 species
Als_g07869 PNH, AGO10, ZLL not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene29180.t1 AGO1, Aspi01Gene29180 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020961.9 AGO7, ZIP Protein argonaute 18 OS=Oryza sativa subsp. japonica 0.01 OrthoFinder output from all 47 species
Cre16.g689647 AGO1 Protein argonaute 1 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Dde_g48495 AGO1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10429131g0010 AGO1 Protein argonaute 1B OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
MA_10431691g0010 AGO4, OCP11 Protein argonaute 16 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
MA_118377g0010 AGO1 RIS-Complex miRNA recruiting factor (AGO1) 0.02 OrthoFinder output from all 47 species
MA_18547g0010 AGO1 Protein argonaute 1A OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Mp1g18110.1 AGO1 RIS-Complex miRNA recruiting factor (AGO1) 0.02 OrthoFinder output from all 47 species
Msp_g46879 AGO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g10399 AGO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g17487 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0075.g017428 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.03 OrthoFinder output from all 47 species
Sam_g27567 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEP HCCA
InterPro domains Description Start Stop
IPR003100 PAZ_dom 357 477
IPR032472 ArgoL2 498 543
IPR032474 Argonaute_N 156 292
IPR003165 Piwi 656 954
IPR014811 ArgoL1 302 352
No external refs found!