1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01026172001

GSVIVT01026172001


No description available


Gene families : OG0000485 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000485_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01026172001

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0001.g000614 ATBCA3, BCA3 beta-type carbonic anhydrase & original description: CDS=345-1325 0.02 OrthoFinder output from all 47 species
Azfi_s0095.g043588 CA18, CA2, BETA CA2 beta-type carbonic anhydrase & original description: CDS=370-1197 0.02 OrthoFinder output from all 47 species
Ceric.08G069000.1 ATBCA3, BCA3,... beta-type carbonic anhydrase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.17G069900.1 ATBCA3, BCA3,... beta-type carbonic anhydrase & original description:... 0.07 OrthoFinder output from all 47 species
GSVIVT01007742001 CA18, CA2, BETA CA2 Carbonic anhydrase, chloroplastic OS=Nicotiana tabacum 0.04 OrthoFinder output from all 47 species
MA_10060293g0010 BCA4, CA4, ATBCA4 Beta carbonic anhydrase 4 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp3g08980.1 CA18, CA2, BETA CA2 Carbonic anhydrase, chloroplastic OS=Pisum sativum... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002153 ATBCA3, BCA3 beta-type carbonic anhydrase & original description: CDS=12-998 0.02 OrthoFinder output from all 47 species
Solyc02g067750.4.1 CA1, ATBCA1,... Carbonic anhydrase, chloroplastic OS=Nicotiana tabacum... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!