LOC_Os12g17320 (Os12g0271700)


Aliases : Os12g0271700

Description : 16.1.2.8 secondary metabolism.isoprenoids.mevalonate pathway.geranyl diphosphate synthase Encodes a protein with solanesyl diphosphate synthase activity. solanesyl diphosphate synthase 2 (SPS2)


Gene families : OG_01_0005055 (Gene family) Phylogenetic Tree(s): OG0005055_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os12g17320
Cluster HCCA cluster: Cluster_223

Target Alias Description ECC score Gene Family Method Actions
AT1G17050 SPS2 solanesyl diphosphate synthase 2 0.05 Gene family
AT1G78510 SPS1 solanesyl diphosphate synthase 1 0.02 Gene family
Cre13.g565650 No alias 16.1.5 secondary metabolism.isoprenoids.terpenoids... 0.03 Gene family
GSVIVT01014066001 No alias 16.1.2.8 secondary metabolism.isoprenoids.mevalonate... 0.07 Gene family
Smo177791 PACid_15406521 16.1.5 secondary metabolism.isoprenoids.terpenoids... 0.08 Gene family
Zm00001d027694 GRMZM2G112728 16.1.5 secondary metabolism.isoprenoids.terpenoids... 0.08 Gene family
Zm00001d039142 GRMZM2G163809 16.1.2.8 secondary metabolism.isoprenoids.mevalonate... 0.02 Gene family

Type GO Term Name Evidence Source
BP GO:0008299 isoprenoid biosynthetic process IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000092 Polyprenyl_synt 121 365
No external refs found!