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  5. GSVIVT01025844001

GSVIVT01025844001 (SUVH1)


Aliases : SUVH1

Description : Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1 OS=Nicotiana tabacum


Gene families : OG0000291 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000291_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01025844001

Target Alias Description ECC score Gene Family Method Actions
AT5G04940 SUVH1 SU(VAR)3-9 homolog 1 0.05 OrthoFinder output from all 47 species
Adi_g012366 SDG23, SUVH6 EC_2.1 transferase transferring one-carbon group &... 0.06 OrthoFinder output from all 47 species
Adi_g112672 SUVH3, SDG19 EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
Aev_g21860 SDG33, SUVH4, KYP EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Ala_g21425 SDG23, SUVH6 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Als_g01953 SUVH3, SDG19 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Aob_g03499 SUVH3, SDG19 EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
Aob_g14811 SDG23, SUVH6 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Aop_g64195 SDG23, SUVH6 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Cba_g05945 SUVH1 EC_2.1 transferase transferring one-carbon group &... 0.05 OrthoFinder output from all 47 species
Cba_g38983 SET22, SDG22, SUVH9 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Ceric.13G012400.1 SDG23, SUVH6,... not classified & original description: pacid=50636550... 0.04 OrthoFinder output from all 47 species
Cre02.g089200 SDG23, SUVH6 Histone-lysine N-methyltransferase, H3 lysine-9 specific... 0.02 OrthoFinder output from all 47 species
Dac_g22044 SUVH3, SDG19 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Dcu_g22273 SUVH3, SDG19 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Ehy_g04949 SET22, SDG22, SUVH9 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
LOC_Os01g70220.1 SDG33, SUVH4,... class V/Su(var) histone methyltransferase component of... 0.03 OrthoFinder output from all 47 species
LOC_Os08g45130.1 SET22, SDG22,... class V/Su(var) histone methyltransferase component of... 0.03 OrthoFinder output from all 47 species
Len_g19979 SUVH1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Len_g54963 SDG33, SUVH4, KYP EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
MA_37876g0010 SUVH3, SDG19 Histone-lysine N-methyltransferase, H3 lysine-9 specific... 0.03 OrthoFinder output from all 47 species
MA_95753g0010 SDG23, SUVH6 class V/Su(var) histone methyltransferase component of... 0.03 OrthoFinder output from all 47 species
Msp_g25542 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g52142 SUVH1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Solyc08g077940.2.1 SUVH5, SGD9,... class V/Su(var) histone methyltransferase component of... 0.03 OrthoFinder output from all 47 species
Solyc09g082050.4.1 SUVH1, Solyc09g082050 class V/Su(var) histone methyltransferase component of... 0.04 OrthoFinder output from all 47 species
Solyc09g090810.3.1 SET22, SDG22,... class V/Su(var) histone methyltransferase component of... 0.03 OrthoFinder output from all 47 species
Zm00001e027327_P003 SUVH1, Zm00001e027327 class V/Su(var) histone methyltransferase component of... 0.02 OrthoFinder output from all 47 species
Zm00001e033130_P002 SUVH3, SDG19,... class V/Su(var) histone methyltransferase component of... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005622 intracellular anatomical structure IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009891 positive regulation of biosynthetic process IEP HCCA
BP GO:0009893 positive regulation of metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010604 positive regulation of macromolecule metabolic process IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0031325 positive regulation of cellular metabolic process IEP HCCA
BP GO:0031328 positive regulation of cellular biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0032784 regulation of DNA-templated transcription elongation IEP HCCA
BP GO:0032786 positive regulation of DNA-templated transcription, elongation IEP HCCA
BP GO:0032968 positive regulation of transcription elongation by RNA polymerase II IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0034243 regulation of transcription elongation by RNA polymerase II IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0045893 positive regulation of DNA-templated transcription IEP HCCA
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0045944 positive regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0048522 positive regulation of cellular process IEP HCCA
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051254 positive regulation of RNA metabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1902680 positive regulation of RNA biosynthetic process IEP HCCA
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP HCCA
InterPro domains Description Start Stop
IPR003105 SRA_YDG 201 255
IPR007728 Pre-SET_dom 261 359
IPR001214 SET_dom 402 451
No external refs found!