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  5. GSVIVT01025699001

GSVIVT01025699001 (NTMC2T1.3, SYT3,...)


Aliases : NTMC2T1.3, SYT3, NTMC2TYPE1.3, ATSYTC, SYTC

Description : Synaptotagmin-3 OS=Arabidopsis thaliana


Gene families : OG0000213 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000213_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01025699001

Target Alias Description ECC score Gene Family Method Actions
AT1G20080 NTMC2T1.2, SYTB,... Calcium-dependent lipid-binding (CaLB domain) family protein 0.04 OrthoFinder output from all 47 species
Aev_g17425 SYT5, NTMC2T2.1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g19615 SYT5, NTMC2T2.1,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g25889 SYT5, NTMC2T2.1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene38053.t1 NTMC2TYPE4,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.1Z077000.1 SYT5, NTMC2T2.1,... not classified & original description: pacid=50588705... 0.02 OrthoFinder output from all 47 species
Dac_g16761 NTMC2TYPE4, NTMC2T4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g23047 SYT5, NTMC2T2.1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g46258 SYT5, NTMC2T2.1,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g10686 SYT5, NTMC2T2.1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g01520 SYT5, NTMC2T2.1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g17237 NTMC2T1.2, SYTB,... membrane tethering protein (SYT1) of... 0.03 OrthoFinder output from all 47 species
LOC_Os01g60340.1 NTMC2T1.2, SYTB,... endoplasmic reticulum-plasma membrane tethering protein... 0.04 OrthoFinder output from all 47 species
LOC_Os06g47130.1 NTMC2T1.3, SYT3,... endoplasmic reticulum-plasma membrane tethering protein... 0.06 OrthoFinder output from all 47 species
MA_10431049g0010 NTMC2T1.2, SYTB,... Synaptotagmin-2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp3g04720.1 NTMC2TYPE4, NTMC2T4 Synaptotagmin-4 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Msp_g01203 NTMC2T1.2, SYTB,... membrane tethering protein (SYT1) of... 0.03 OrthoFinder output from all 47 species
Msp_g02059 NTMC2T1.2, SYTB,... membrane tethering protein (SYT1) of... 0.02 OrthoFinder output from all 47 species
Nbi_g15829 SYT5, NTMC2T2.1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g10258 NTMC2TYPE4, NTMC2T4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g28749 NTMC2TYPE4, NTMC2T4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g21473 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g39515 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc09g007860.4.1 NTMC2T1.3, SYT3,... endoplasmic reticulum-plasma membrane tethering protein... 0.03 OrthoFinder output from all 47 species
Tin_g02695 NTMC2TYPE4, NTMC2T4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e010253_P001 NTMC2T1.2, SYTB,... endoplasmic reticulum-plasma membrane tethering protein... 0.03 OrthoFinder output from all 47 species
Zm00001e013057_P001 NTMC2T1.3, SYT3,... endoplasmic reticulum-plasma membrane tethering protein... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR039010 Synaptotagmin_SMP 67 249
IPR000008 C2_dom 263 360
IPR000008 C2_dom 430 530
No external refs found!