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  5. GSVIVT01025521001

GSVIVT01025521001


Description : Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum


Gene families : OG0000190 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000190_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01025521001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00082650 evm_27.TU.AmTr_v1... Short-chain dehydrogenase TIC 32, chloroplastic... 0.04 OrthoFinder output from all 47 species
AMTR_s00085p00054430 evm_27.TU.AmTr_v1... Short-chain dehydrogenase TIC 32, chloroplastic... 0.03 OrthoFinder output from all 47 species
AMTR_s00107p00149370 evm_27.TU.AmTr_v1... Short-chain dehydrogenase TIC 32, chloroplastic... 0.03 OrthoFinder output from all 47 species
AT4G23430 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G50130 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.05 OrthoFinder output from all 47 species
Aev_g16585 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g21575 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g37903 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g11001 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g44592 No alias component *(Tic32) of inner envelope TIC translocation... 0.02 OrthoFinder output from all 47 species
Als_g63765 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g23987 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g05416 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g26691 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene00737.t1 Aspi01Gene00737 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene16465.t1 Aspi01Gene16465 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene16465.t2 Aspi01Gene16465 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene57782.t1 Aspi01Gene57782 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene63398.t1 Aspi01Gene63398 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene69014.t1 Aspi01Gene69014 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.06G025800.1 Ceric.06G025800 not classified & original description: pacid=50620122... 0.03 OrthoFinder output from all 47 species
Ceric.07G007800.1 Ceric.07G007800 not classified & original description: pacid=50627820... 0.03 OrthoFinder output from all 47 species
Ceric.11G063200.1 Ceric.11G063200 not classified & original description: pacid=50595578... 0.03 OrthoFinder output from all 47 species
Ceric.32G064100.1 Ceric.32G064100 not classified & original description: pacid=50598429... 0.03 OrthoFinder output from all 47 species
Dac_g23691 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g50051 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g07148 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g24464 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g00772 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g05415 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01019612001 No alias Short-chain dehydrogenase TIC 32, chloroplastic... 0.02 OrthoFinder output from all 47 species
GSVIVT01028900001 No alias Protein translocation.chloroplast.inner envelope TIC... 0.03 OrthoFinder output from all 47 species
Gb_07739 No alias Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum... 0.03 OrthoFinder output from all 47 species
LOC_Os03g02460.1 LOC_Os03g02460 Short-chain dehydrogenase TIC 32, chloroplastic... 0.03 OrthoFinder output from all 47 species
LOC_Os10g40020.3 LOC_Os10g40020 Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum... 0.03 OrthoFinder output from all 47 species
Len_g13416 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g13417 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g17256 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10432182g0010 No alias Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum... 0.05 OrthoFinder output from all 47 species
Msp_g31463 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g07973 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g12126 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g37040 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g22836 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g42499 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g112540.4.1 Solyc03g112540 Short-chain dehydrogenase TIC 32, chloroplastic... 0.03 OrthoFinder output from all 47 species
Solyc09g010510.4.1 Solyc09g010510 Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum... 0.03 OrthoFinder output from all 47 species
Spa_g25270 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g28178 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g46897 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g04538 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g15683 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e016903_P001 Zm00001e016903 Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum... 0.03 OrthoFinder output from all 47 species
Zm00001e036623_P001 Zm00001e036623 Short-chain dehydrogenase TIC 32, chloroplastic... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004559 alpha-mannosidase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006013 mannose metabolic process IEP HCCA
MF GO:0015923 mannosidase activity IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002347 SDR_fam 35 183
No external refs found!