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  5. GSVIVT01025505001

GSVIVT01025505001 (ATCRT1)


Aliases : ATCRT1

Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-type E3 ligase


Gene families : OG0000101 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000101_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01025505001

Target Alias Description ECC score Gene Family Method Actions
Adi_g111359 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aev_g02428 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g06321 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g03741 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g10356 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.07G095600.1 Ceric.07G095600 not classified & original description: pacid=50626992... 0.05 OrthoFinder output from all 47 species
Ceric.16G066200.1 Ceric.16G066200 RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000880.42 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Dde_g02237 ATCRT1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g08256 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g51480 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g14500 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g24418 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
MA_170709g0010 No alias E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp7g15970.1 No alias E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Msp_g10633 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g03871 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Pir_g24945 CIP8 RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
Pnu_g06037 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g12414 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0035.g011411 No alias not classified & original description: CDS=1-1419 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012146 No alias not classified & original description: CDS=1-969 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0106.g020256 No alias not classified & original description: CDS=1-1698 0.02 OrthoFinder output from all 47 species
Sam_g09427 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Spa_g05859 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g06543 RHC1A not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g12997 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14660 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Spa_g20368 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g55156 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e016135_P001 Zm00001e016135 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e037527_P001 Zm00001e037527 E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e038273_P001 Zm00001e038273 E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0061630 ubiquitin protein ligase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR039525 RNF126-like_zinc-ribbon 8 39
IPR001841 Znf_RING 193 235
No external refs found!