1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01025404001

GSVIVT01025404001 (HUB2)


Aliases : HUB2

Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-HCa-type E3 ligase


Gene families : OG0001584 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001584_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01025404001

Target Alias Description ECC score Gene Family Method Actions
Adi_g059356 RDO4, HUB1 E3 ubiquitin ligase *(HUB) & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g088508 RDO4, HUB1 E3 ubiquitin ligase *(HUB) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g01150 HUB2 E3 ubiquitin ligase *(HUB) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g02332 HUB2 E3 ubiquitin ligase *(HUB) & original description: none 0.02 OrthoFinder output from all 47 species
Cre14.g625802 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Dcu_g04023 HUB2 E3 ubiquitin ligase *(HUB) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g04109 HUB2 E3 ubiquitin ligase *(HUB) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g06195 HUB2 E3 ubiquitin ligase *(HUB) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g35898 HUB2 E3 ubiquitin ligase *(HUB) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g10428 RDO4, HUB1 E3 ubiquitin ligase *(HUB) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g01320 HUB2 E3 ubiquitin ligase *(HUB) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07599 HUB2 E3 ubiquitin ligase *(HUB) & original description: none 0.02 OrthoFinder output from all 47 species
Smo175555 HUB2 Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Tin_g06090 HUB2 E3 ubiquiTin ligase *(HUB) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g15227 RDO4, HUB1 E3 ubiquiTin ligase *(HUB) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e013143_P005 RDO4, HUB1,... RING-HC-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e030249_P002 RDO4, HUB1,... RING-HC-class E3 ligase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
MF GO:0042393 histone binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!