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  5. GSVIVT01025280001

GSVIVT01025280001


Description : Polyadenylate-binding protein RBP47B OS=Arabidopsis thaliana


Gene families : OG0000531 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000531_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01025280001

Target Alias Description ECC score Gene Family Method Actions
AT4G27000 ATRBP45C RNA-binding (RRM/RBD/RNP motifs) family protein 0.04 OrthoFinder output from all 47 species
Adi_g078298 ATRBP47B, RBP47B regulatory factor *(RBP45/47) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Azfi_s0010.g012138 No alias regulatory factor *(RBP45/47) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Cba_g05169 No alias regulatory factor *(RBP45/47) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Ceric.33G008000.1 ATRBP47B,... regulatory factor *(RBP45/47) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Dac_g07596 No alias regulatory factor *(RBP45/47) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
LOC_Os03g37270.1 ATRBP45C, LOC_Os03g37270 mRNA-binding regulatory factor (RBP45/47) 0.03 OrthoFinder output from all 47 species
LOC_Os04g53440.1 RBP45B,... mRNA-binding regulatory factor (RBP45/47) 0.04 OrthoFinder output from all 47 species
LOC_Os08g09100.1 RBP45B,... mRNA-binding regulatory factor (RBP45/47) 0.05 OrthoFinder output from all 47 species
MA_10430323g0010 No alias mRNA-binding regulatory factor (RBP45/47) 0.06 OrthoFinder output from all 47 species
MA_29443g0010 ATRBP45C mRNA-binding regulatory factor (RBP45/47) 0.03 OrthoFinder output from all 47 species
Ore_g09196 No alias regulatory factor *(RBP45/47) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Ore_g34353 No alias regulatory factor *(RBP45/47) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Pir_g18156 No alias regulatory factor *(RBP45/47) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Sam_g15117 No alias regulatory factor *(RBP45/47) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Sam_g39348 No alias regulatory factor *(RBP45/47) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Zm00001e000547_P001 Zm00001e000547 mRNA-binding regulatory factor (RBP45/47) 0.03 OrthoFinder output from all 47 species
Zm00001e010479_P003 ATRBP45A,... mRNA-binding regulatory factor (RBP45/47) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 255 317
IPR000504 RRM_dom 43 111
IPR000504 RRM_dom 136 201
No external refs found!