GSVIVT01025228001


No description available


Gene families : OG0000236 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000236_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01025228001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00100500 evm_27.TU.AmTr_v1... No description available 0.12 OrthoFinder output from all 47 species
AT1G43020 No alias Protein of unknown function, DUF547 0.08 OrthoFinder output from all 47 species
AT3G12540 No alias Protein of unknown function, DUF547 0.07 OrthoFinder output from all 47 species
AT4G37080 No alias Protein of unknown function, DUF547 0.04 OrthoFinder output from all 47 species
AT5G60720 No alias Protein of unknown function, DUF547 0.32 OrthoFinder output from all 47 species
Adi_g008972 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g012572 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g060741 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g060878 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g075360 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g103810 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g115514 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g13624 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g13882 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g28628 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g29125 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g30198 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g39947 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g19268 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g03826 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g10150 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g13551 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g36638 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g11930 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08833 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g13273 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g70386 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene46206.t1 Aspi01Gene46206 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene50311.t2 Aspi01Gene50311 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene62766.t1 Aspi01Gene62766 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene66708.t1 Aspi01Gene66708 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0005.g009305 No alias not classified & original description: CDS=291-2180 0.05 OrthoFinder output from all 47 species
Cba_g03959 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g05260 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g24608 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.02G060000.1 Ceric.02G060000 not classified & original description: pacid=50584416... 0.05 OrthoFinder output from all 47 species
Ceric.12G063900.1 Ceric.12G063900 not classified & original description: pacid=50600480... 0.05 OrthoFinder output from all 47 species
Ceric.20G014100.1 Ceric.20G014100 not classified & original description: pacid=50566742... 0.03 OrthoFinder output from all 47 species
Ceric.21G009500.1 Ceric.21G009500 not classified & original description: pacid=50602780... 0.02 OrthoFinder output from all 47 species
Ceric.25G053000.1 Ceric.25G053000 not classified & original description: pacid=50593159... 0.02 OrthoFinder output from all 47 species
Ceric.28G000600.1 Ceric.28G000600 not classified & original description: pacid=50570870... 0.02 OrthoFinder output from all 47 species
Dac_g03837 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g12477 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g13842 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g14778 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g16017 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g18773 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g23842 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g38820 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g20241 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23028 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dde_g51927 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g02735 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g04973 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06906 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g06964 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01001956001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01002634001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01014994001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01029449001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_10011 No alias no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
LOC_Os01g05480.3 LOC_Os01g05480 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os02g05900.1 LOC_Os02g05900 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os03g64230.1 LOC_Os03g64230 no hits & (original description: none) 0.19 OrthoFinder output from all 47 species
LOC_Os08g40420.1 LOC_Os08g40420 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
LOC_Os09g28850.1 LOC_Os09g28850 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os09g32010.1 LOC_Os09g32010 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Len_g07477 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g59225 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g27106 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g37222 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g39853 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_124933g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_19648g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_90792g0010 No alias no hits & (original description: none) 0.13 OrthoFinder output from all 47 species
Mp7g02200.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g07483 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g15458 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g21403 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g21647 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g31356 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Nbi_g03119 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g03702 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g07704 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g10137 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g08610 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g07044 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g14919 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g36591 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g45564 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g03174 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03964 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g17419 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g62402 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000442 No alias not classified & original description: CDS=698-2671 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001935 No alias not classified & original description: CDS=1-2133 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0075.g017355 No alias not classified & original description: CDS=571-2316 0.04 OrthoFinder output from all 47 species
Sam_g09691 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g25536 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g30130 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g35283 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g40880 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g109270.3.1 Solyc01g109270 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc02g065480.2.1 Solyc02g065480 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc06g008560.2.1 Solyc06g008560 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc11g069840.3.1 Solyc11g069840 no hits & (original description: none) 0.23 OrthoFinder output from all 47 species
Spa_g10823 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14701 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g26671 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g51544 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13862 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g29415 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000910_P003 Zm00001e000910 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e011613_P001 Zm00001e011613 no hits & (original description: none) 0.21 OrthoFinder output from all 47 species
Zm00001e013087_P001 Zm00001e013087 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e013201_P001 Zm00001e013201 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e021904_P001 Zm00001e021904 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Zm00001e034560_P003 Zm00001e034560 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0005856 cytoskeleton IEP HCCA
CC GO:0005885 Arp2/3 protein complex IEP HCCA
BP GO:0007015 actin filament organization IEP HCCA
BP GO:0008064 regulation of actin polymerization or depolymerization IEP HCCA
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP HCCA
MF GO:0015020 glucuronosyltransferase activity IEP HCCA
CC GO:0015629 actin cytoskeleton IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
BP GO:0030832 regulation of actin filament length IEP HCCA
BP GO:0030833 regulation of actin filament polymerization IEP HCCA
BP GO:0032271 regulation of protein polymerization IEP HCCA
BP GO:0032535 regulation of cellular component size IEP HCCA
BP GO:0032956 regulation of actin cytoskeleton organization IEP HCCA
BP GO:0032970 regulation of actin filament-based process IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
BP GO:0034314 Arp2/3 complex-mediated actin nucleation IEP HCCA
BP GO:0043254 regulation of protein-containing complex assembly IEP HCCA
BP GO:0044087 regulation of cellular component biogenesis IEP HCCA
BP GO:0045010 actin nucleation IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051493 regulation of cytoskeleton organization IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
BP GO:0090066 regulation of anatomical structure size IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
BP GO:0110053 regulation of actin filament organization IEP HCCA
BP GO:1902903 regulation of supramolecular fiber organization IEP HCCA
InterPro domains Description Start Stop
IPR025757 MIP1_Leuzipper 37 117
IPR006869 DUF547 396 528
No external refs found!