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Aliases : ATPAL1, PAL1
Description : Secondary metabolism.phenolics.p-coumaroyl-CoA synthesis.phenylalanine ammonia lyase (PAL)
Gene families : OG0000270 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000270_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01025214001 | |
| Cluster | HCCA: Cluster_43 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00024p00201680 | ATPAL2, PAL2,... | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.05 | OrthoFinder output from all 47 species | |
| AMTR_s00024p00201930 | ATPAL2, PAL2,... | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00024p00202590 | ATPAL2, PAL2,... | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00148p00088930 | ATPAL1, PAL1,... | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.07 | OrthoFinder output from all 47 species | |
| AT2G37040 | ATPAL1, PAL1 | PHE ammonia lyase 1 | 0.06 | OrthoFinder output from all 47 species | |
| AT3G53260 | ATPAL2, PAL2 | phenylalanine ammonia-lyase 2 | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g018720 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g059316 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g059368 | ATPAL1, PAL1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g084112 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g107906 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g01488 | ATPAL1, PAL1 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aev_g15105 | ATPAL1, PAL1 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g37417 | ATPAL2, PAL2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g39213 | ATPAL1, PAL1 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g30887 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.1 | OrthoFinder output from all 47 species | |
| Als_g38575 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g06672 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aob_g11634 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aob_g23707 | ATPAL2, PAL2 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g27204 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene05559.t1 | PAL4, Aspi01Gene05559 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene05640.t1 | PAL4, Aspi01Gene05640 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene18088.t1 | ATPAL1, PAL1,... | EC_4.3 carbon-nitrogen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene18089.t1 | ATPAL1, PAL1,... | EC_4.3 carbon-nitrogen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene23282.t1 | PAL4, Aspi01Gene23282 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0009.g011807 | ATPAL1, PAL1 | EC_4.3 carbon-nitrogen lyase & original description: CDS=1-2211 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0063.g035292 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: CDS=1-2358 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0096.g043679 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: CDS=1-2310 | 0.07 | OrthoFinder output from all 47 species | |
| Cba_g04033 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g19863 | ATPAL1, PAL1 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g22478 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.14G035200.1 | PAL4, Ceric.14G035200 | EC_4.3 carbon-nitrogen lyase & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.28G008100.1 | PAL4, Ceric.28G008100 | EC_4.3 carbon-nitrogen lyase & original description:... | 0.05 | OrthoFinder output from all 47 species | |
| Dac_g27041 | ATPAL2, PAL2 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g37006 | ATPAL1, PAL1 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g01768 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Dcu_g08202 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g24302 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g36866 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Dde_g16538 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g25081 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01006148001 | PAL4 | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01015138001 | ATPAL2, PAL2 | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01024292001 | ATPAL1, PAL1 | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01024299001 | ATPAL1, PAL1 | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01024303001 | ATPAL1, PAL1 | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01024305001 | ATPAL1, PAL1 | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01024306001 | ATPAL1, PAL1 | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01024315001 | ATPAL1, PAL1 | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_16672 | ATPAL1, PAL1 | phenylalanine ammonia lyase (PAL) | 0.09 | OrthoFinder output from all 47 species | |
| Gb_41796 | PAL4 | phenylalanine ammonia lyase (PAL) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os02g41630.2 | ATPAL1, PAL1,... | phenylalanine ammonia lyase (PAL) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os02g41650.3 | ATPAL1, PAL1,... | phenylalanine ammonia lyase (PAL) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os02g41680.1 | ATPAL1, PAL1,... | phenylalanine ammonia lyase (PAL) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g43760.1 | ATPAL1, PAL1,... | phenylalanine ammonia lyase (PAL) | 0.08 | OrthoFinder output from all 47 species | |
| LOC_Os04g43800.1 | ATPAL1, PAL1,... | phenylalanine ammonia lyase (PAL) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os05g35290.1 | ATPAL1, PAL1,... | phenylalanine ammonia lyase (PAL) | 0.03 | OrthoFinder output from all 47 species | |
| Len_g07383 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g38249 | ATPAL1, PAL1 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g54933 | ATPAL1, PAL1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g59256 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g14564 | ATPAL1, PAL1 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_123220g0010 | ATPAL2, PAL2 | phenylalanine ammonia lyase (PAL) | 0.04 | OrthoFinder output from all 47 species | |
| MA_189052g0010 | ATPAL1, PAL1 | Phenylalanine ammonia-lyase OS=Pinus taeda... | 0.03 | OrthoFinder output from all 47 species | |
| MA_44561g0010 | PAL4 | phenylalanine ammonia lyase (PAL) | 0.12 | OrthoFinder output from all 47 species | |
| Mp1g05190.1 | ATPAL1, PAL1 | phenylalanine ammonia lyase (PAL) | 0.06 | OrthoFinder output from all 47 species | |
| Mp1g10150.1 | PAL4 | phenylalanine ammonia lyase (PAL) | 0.06 | OrthoFinder output from all 47 species | |
| Mp4g03590.1 | PAL4 | phenylalanine ammonia lyase (PAL) | 0.03 | OrthoFinder output from all 47 species | |
| Mp4g14110.1 | ATPAL1, PAL1 | phenylalanine ammonia lyase (PAL) | 0.07 | OrthoFinder output from all 47 species | |
| Mp4g14130.1 | ATPAL2, PAL2 | Phenylalanine ammonia-lyase class 1 (Fragment)... | 0.06 | OrthoFinder output from all 47 species | |
| Mp4g14140.1 | ATPAL1, PAL1 | phenylalanine ammonia lyase (PAL) | 0.07 | OrthoFinder output from all 47 species | |
| Mp4g14160.1 | ATPAL2, PAL2 | phenylalanine ammonia lyase (PAL) | 0.07 | OrthoFinder output from all 47 species | |
| Mp4g14170.1 | PAL4 | phenylalanine ammonia lyase (PAL) | 0.05 | OrthoFinder output from all 47 species | |
| Mp4g14210.1 | PAL4 | phenylalanine ammonia lyase (PAL) | 0.03 | OrthoFinder output from all 47 species | |
| Mp7g14880.1 | ATPAL1, PAL1 | phenylalanine ammonia lyase (PAL) | 0.07 | OrthoFinder output from all 47 species | |
| Msp_g28220 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g29412 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g35210 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g08420 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g15973 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g28058 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g04296 | ATPAL1, PAL1 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g16429 | ATPAL2, PAL2 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g35799 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g40543 | ATPAL1, PAL1 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Pir_g18585 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g19939 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g26446 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.13 | OrthoFinder output from all 47 species | |
| Pir_g30613 | ATPAL2, PAL2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g18294 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c10_21810V3.1 | PAL4, Pp3c10_21810 | phenylalanine ammonia-lyase 4 | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c19_13690V3.1 | PAL4, Pp3c19_13690 | phenylalanine ammonia-lyase 4 | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c21_7640V3.1 | ATPAL2, PAL2, Pp3c21_7640 | phenylalanine ammonia-lyase 2 | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c24_13110V3.1 | PAL4, Pp3c24_13110 | phenylalanine ammonia-lyase 4 | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g03356 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g08363 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g30570 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Solyc05g056170.3.1 | ATPAL2, PAL2,... | phenylalanine ammonia lyase (PAL) | 0.11 | OrthoFinder output from all 47 species | |
| Solyc09g007910.4.1 | ATPAL1, PAL1,... | phenylalanine ammonia lyase (PAL) | 0.05 | OrthoFinder output from all 47 species | |
| Solyc09g007920.4.1 | ATPAL1, PAL1,... | phenylalanine ammonia lyase (PAL) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc10g011920.3.1 | ATPAL1, PAL1,... | Phenylalanine ammonia-lyase 1 OS=Solanum tuberosum... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc10g011930.1.1 | ATPAL1, PAL1,... | Phenylalanine ammonia-lyase OS=Solanum lycopersicum... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc10g086180.2.1 | ATPAL1, PAL1,... | phenylalanine ammonia lyase (PAL) | 0.06 | OrthoFinder output from all 47 species | |
| Spa_g08001 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g16564 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g26458 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g08348 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g08349 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g10052 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.12 | OrthoFinder output from all 47 species | |
| Tin_g14732 | ATPAL1, PAL1 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e007572_P001 | ATPAL1, PAL1,... | phenylalanine ammonia lyase (PAL) | 0.07 | OrthoFinder output from all 47 species | |
| Zm00001e015157_P001 | ATPAL1, PAL1,... | phenylalanine ammonia lyase (PAL) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e023031_P002 | PAL4, Zm00001e023031 | phenylalanine ammonia lyase (PAL) | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e023033_P001 | ATPAL1, PAL1,... | phenylalanine ammonia lyase (PAL) | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0003854 | 3-beta-hydroxy-delta5-steroid dehydrogenase activity | IEP | HCCA |
| MF | GO:0005506 | iron ion binding | IEP | HCCA |
| BP | GO:0006694 | steroid biosynthetic process | IEP | HCCA |
| BP | GO:0006855 | xenobiotic transmembrane transport | IEP | HCCA |
| BP | GO:0008202 | steroid metabolic process | IEP | HCCA |
| MF | GO:0015291 | secondary active transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015297 | antiporter activity | IEP | HCCA |
| MF | GO:0016229 | steroid dehydrogenase activity | IEP | HCCA |
| MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
| MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | HCCA |
| MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | HCCA |
| MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | HCCA |
| MF | GO:0020037 | heme binding | IEP | HCCA |
| MF | GO:0033764 | steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | HCCA |
| BP | GO:0042908 | xenobiotic transport | IEP | HCCA |
| MF | GO:0046906 | tetrapyrrole binding | IEP | HCCA |
| MF | GO:0050662 | obsolete coenzyme binding | IEP | HCCA |
| BP | GO:0055114 | obsolete oxidation-reduction process | IEP | HCCA |
| No external refs found! |