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No description available
Gene families : OG0001473 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001473_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01025189001 | |
| Cluster | HCCA: Cluster_62 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00105p00048810 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.2 | OrthoFinder output from all 47 species | |
| AMTR_s00148p00026900 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.07 | OrthoFinder output from all 47 species | |
| AT2G37190 | No alias | Ribosomal protein L11 family protein | 0.29 | OrthoFinder output from all 47 species | |
| AT3G53430 | No alias | Ribosomal protein L11 family protein | 0.22 | OrthoFinder output from all 47 species | |
| AT5G60670 | No alias | Ribosomal protein L11 family protein | 0.24 | OrthoFinder output from all 47 species | |
| Adi_g063886 | No alias | component *(uL11) of large ribosomal-subunit (LSU)... | 0.06 | OrthoFinder output from all 47 species | |
| Adi_g116841 | No alias | component *(uL11) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g128238 | No alias | component *(uL11) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g29977 | No alias | component *(uL11) of large ribosomal-subunit (LSU)... | 0.08 | OrthoFinder output from all 47 species | |
| Ala_g38012 | No alias | component *(uL11) of large ribosomal-subunit (LSU)... | 0.13 | OrthoFinder output from all 47 species | |
| Als_g04839 | No alias | component *(uL11) of large ribosomal-subunit (LSU)... | 0.12 | OrthoFinder output from all 47 species | |
| Als_g10325 | No alias | component *(uL11) of large ribosomal-subunit (LSU)... | 0.12 | OrthoFinder output from all 47 species | |
| Als_g50372 | No alias | component *(uL11) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g62499 | No alias | component *(uL11) of large ribosomal-subunit (LSU)... | 0.08 | OrthoFinder output from all 47 species | |
| Aop_g06826 | No alias | component *(uL11) of large ribosomal-subunit (LSU)... | 0.23 | OrthoFinder output from all 47 species | |
| Aop_g52643 | No alias | component *(uL11) of large ribosomal-subunit (LSU)... | 0.08 | OrthoFinder output from all 47 species | |
| Aop_g70967 | No alias | component *(uL11) of large ribosomal-subunit (LSU)... | 0.15 | OrthoFinder output from all 47 species | |
| Aspi01Gene40271.t1 | Aspi01Gene40271 | component *(uL11) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0004.g008501 | No alias | component *(uL11) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0279.g062260 | No alias | component *(uL11) of large ribosomal-subunit (LSU)... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.15G067600.1 | Ceric.15G067600 | component *(uL11) of large ribosomal-subunit (LSU)... | 0.21 | OrthoFinder output from all 47 species | |
| Ceric.23G070600.1 | Ceric.23G070600 | component *(uL11) of large ribosomal-subunit (LSU)... | 0.19 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00001339.27 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.19 | OrthoFinder output from all 47 species | |
| Cre12.g528750 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.29 | OrthoFinder output from all 47 species | |
| Dac_g01966 | No alias | component *(uL11) of large ribosomal-subunit (LSU)... | 0.15 | OrthoFinder output from all 47 species | |
| Dcu_g34940 | No alias | component *(uL11) of large ribosomal-subunit (LSU)... | 0.11 | OrthoFinder output from all 47 species | |
| LOC_Os02g47140.1 | LOC_Os02g47140 | component RPL12 of LSU proteome component | 0.2 | OrthoFinder output from all 47 species | |
| LOC_Os04g50990.1 | LOC_Os04g50990 | component RPL12 of LSU proteome component | 0.28 | OrthoFinder output from all 47 species | |
| Len_g13594 | No alias | component *(uL11) of large ribosomal-subunit (LSU)... | 0.07 | OrthoFinder output from all 47 species | |
| Lfl_g22014 | No alias | component *(uL11) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g36573 | No alias | component *(uL11) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| MA_10427147g0010 | No alias | component RPL12 of LSU proteome component | 0.16 | OrthoFinder output from all 47 species | |
| Mp3g02020.1 | No alias | component RPL12 of LSU proteome component | 0.33 | OrthoFinder output from all 47 species | |
| Msp_g37966 | No alias | component *(uL11) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g38598 | No alias | component *(uL11) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g45524 | No alias | component *(uL11) of large ribosomal-subunit (LSU)... | 0.07 | OrthoFinder output from all 47 species | |
| Nbi_g12624 | No alias | component *(uL11) of large ribosomal-subunit (LSU)... | 0.07 | OrthoFinder output from all 47 species | |
| Pir_g02380 | No alias | component *(uL11) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g02937 | No alias | component *(uL11) of large ribosomal-subunit (LSU)... | 0.06 | OrthoFinder output from all 47 species | |
| Pir_g37022 | No alias | component *(uL11) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c15_14410V3.1 | Pp3c15_14410 | Ribosomal protein L11 family protein | 0.23 | OrthoFinder output from all 47 species | |
| Pp3c6_19290V3.1 | Pp3c6_19290 | Ribosomal protein L11 family protein | 0.14 | OrthoFinder output from all 47 species | |
| Ppi_g06745 | No alias | component *(uL11) of large ribosomal-subunit (LSU)... | 0.06 | OrthoFinder output from all 47 species | |
| Ppi_g23184 | No alias | component *(uL11) of large ribosomal-subunit (LSU)... | 0.1 | OrthoFinder output from all 47 species | |
| Ppi_g28177 | No alias | component *(uL11) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g39860 | No alias | component *(uL11) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g02646 | No alias | component *(uL11) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g05606 | No alias | component *(uL11) of large ribosomal-subunit (LSU)... | 0.07 | OrthoFinder output from all 47 species | |
| Sam_g33904 | No alias | component *(uL11) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g40646 | No alias | component *(uL11) of large ribosomal-subunit (LSU)... | 0.07 | OrthoFinder output from all 47 species | |
| Smo227409 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.09 | OrthoFinder output from all 47 species | |
| Solyc06g075180.1.1 | Solyc06g075180 | component RPL12 of LSU proteome component | 0.24 | OrthoFinder output from all 47 species | |
| Solyc11g065670.1.1 | Solyc11g065670 | component RPL12 of LSU proteome component | 0.19 | OrthoFinder output from all 47 species | |
| Solyc11g069440.1.1 | Solyc11g069440 | component RPL12 of LSU proteome component | 0.3 | OrthoFinder output from all 47 species | |
| Spa_g04458 | No alias | component *(uL11) of large ribosomal-subunit (LSU)... | 0.16 | OrthoFinder output from all 47 species | |
| Spa_g04459 | No alias | component *(uL11) of large ribosomal-subunit (LSU)... | 0.18 | OrthoFinder output from all 47 species | |
| Spa_g06495 | No alias | component *(uL11) of large ribosomal-subunit (LSU)... | 0.07 | OrthoFinder output from all 47 species | |
| Spa_g22192 | No alias | component *(uL11) of large ribosomal-subunit (LSU)... | 0.09 | OrthoFinder output from all 47 species | |
| Spa_g36914 | No alias | component *(uL11) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g46996 | No alias | component *(uL11) of large ribosomal-subunit (LSU)... | 0.06 | OrthoFinder output from all 47 species | |
| Tin_g23699 | No alias | component *(uL11) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e007067_P001 | Zm00001e007067 | component RPL12 of LSU proteome component | 0.21 | OrthoFinder output from all 47 species | |
| Zm00001e008316_P001 | Zm00001e008316 | component RPL12 of LSU proteome component | 0.23 | OrthoFinder output from all 47 species | |
| Zm00001e023297_P001 | Zm00001e023297 | component RPL12 of LSU proteome component | 0.28 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005622 | intracellular anatomical structure | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |