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Aliases : LBD11
Description : RNA biosynthesis.transcriptional activation.AS2/LOB transcription factor
Gene families : OG0000114 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000114_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00080p00153120 | LBD1,... | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.02 | OrthoFinder output from all 47 species | |
| AT1G16530 | LBD3, ASL9 | ASYMMETRIC LEAVES 2-like 9 | 0.04 | OrthoFinder output from all 47 species | |
| AT2G42440 | No alias | Lateral organ boundaries (LOB) domain family protein | 0.03 | OrthoFinder output from all 47 species | |
| AT3G26660 | LBD24 | LOB domain-containing protein 24 | 0.04 | OrthoFinder output from all 47 species | |
| AT3G27650 | LBD25 | LOB domain-containing protein 25 | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g19447 | LOB | AS2/LOB-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene52657.t1 | LBD15, ASL11,... | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0020.g015370 | LBD25 | AS2/LOB-type transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.14G090000.1 | LBD20, Ceric.14G090000 | AS2/LOB-type transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g32484 | LBD15, ASL11 | AS2/LOB-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g46319 | LBD20 | AS2/LOB-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01006269001 | No alias | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01016326001 | LBD11 | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.1 | OrthoFinder output from all 47 species | |
| GSVIVT01020353001 | LBD4 | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01028295001 | LBD16, ASL18 | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01029979001 | LBD20 | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01032592001 | LBD27, SCP | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_16914 | LBD1 | transcription factor (AS2/LOB) | 0.02 | OrthoFinder output from all 47 species | |
| Gb_21109 | LBD4 | transcription factor (AS2/LOB) | 0.04 | OrthoFinder output from all 47 species | |
| Gb_22180 | LBD11 | transcription factor (AS2/LOB) | 0.02 | OrthoFinder output from all 47 species | |
| Gb_40767 | LBD15, ASL11 | transcription factor (AS2/LOB) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g17810.1 | LBD11, LOC_Os03g17810 | transcription factor (AS2/LOB) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g45750.1 | LBD4, LOC_Os03g45750 | transcription factor (AS2/LOB) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os05g34450.1 | AS2, LOC_Os05g34450 | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
| Len_g43629 | LBD15, ASL11 | AS2/LOB-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| MA_101817g0010 | LBD29, ASL16 | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
| MA_19148g0010 | LBD11 | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
| MA_292200g0010 | LBD11 | transcription factor (AS2/LOB) | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g56591 | LBD15, ASL11 | AS2/LOB-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Pnu_g05081 | AS2 | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g42819 | LBD20 | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g60181 | LBD15, ASL11 | AS2/LOB-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g16209 | LBD15, ASL11 | AS2/LOB-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g40992 | LOB | AS2/LOB-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g32137 | LOB | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e016785_P005 | LOB, Zm00001e016785 | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005216 | monoatomic ion channel activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| BP | GO:0006811 | monoatomic ion transport | IEP | HCCA |
| MF | GO:0015075 | monoatomic ion transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015267 | channel activity | IEP | HCCA |
| CC | GO:0016020 | membrane | IEP | HCCA |
| MF | GO:0022803 | passive transmembrane transporter activity | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004883 | LOB | 40 | 137 |
| No external refs found! |