GSVIVT01024986001

Description : RNA biosynthesis.transcriptional activation.C2C2 superfamily.DOF transcription factor

Gene families : OG0000067 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01024986001

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00012p00176640	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.06	OrthoFinder output from all 47 species
AMTR_s00059p00213350	ADOF1, DOF1,...	RNA biosynthesis.transcriptional activation.C2C2...	0.03	OrthoFinder output from all 47 species
AT1G29160	No alias	Dof-type zinc finger DNA-binding family protein	0.04	OrthoFinder output from all 47 species
AT2G28510	No alias	Dof-type zinc finger DNA-binding family protein	0.05	OrthoFinder output from all 47 species
AT2G34140	No alias	Dof-type zinc finger DNA-binding family protein	0.05	OrthoFinder output from all 47 species
AT4G00940	No alias	Dof-type zinc finger DNA-binding family protein	0.02	OrthoFinder output from all 47 species
AT5G60200	TMO6	TARGET OF MONOPTEROS 6	0.08	OrthoFinder output from all 47 species
Adi_g007049	CDF2	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g007394	TMO6	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g056971	TMO6	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g058001	OBP4	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g04622	TMO6	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g06704	OBP4	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g08042	OBP3	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g16804	CDF3	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g04342	OBP4	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.19G013700.1	TMO6, Ceric.19G013700	transcription factor *(DOF) & original description:...	0.06	OrthoFinder output from all 47 species
Ceric.22G032900.1	TMO6, Ceric.22G032900	transcription factor *(DOF) & original description:...	0.02	OrthoFinder output from all 47 species
Dac_g02618	TMO6	transcription factor *(DOF) & original description: none	0.06	OrthoFinder output from all 47 species
Dac_g16471	No alias	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g37632	OBP4	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g26026	No alias	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g09129	TMO6	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g16037	ADOF2, DOF2	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g27889	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01005057001	TMO6	RNA biosynthesis.transcriptional activation.C2C2...	0.04	OrthoFinder output from all 47 species
GSVIVT01016538001	OBP3	RNA biosynthesis.transcriptional activation.C2C2...	0.03	OrthoFinder output from all 47 species
GSVIVT01016887001	ADOF1, DOF1	RNA biosynthesis.transcriptional activation.C2C2...	0.03	OrthoFinder output from all 47 species
GSVIVT01021212001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.04	OrthoFinder output from all 47 species
Gb_20867	CDF3	Cyclic dof factor 3 OS=Arabidopsis thaliana...	0.06	OrthoFinder output from all 47 species
Gb_23561	TMO6	transcription factor (DOF)	0.05	OrthoFinder output from all 47 species
LOC_Os01g15900.1	CDF2, LOC_Os01g15900	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
LOC_Os02g15350.1	LOC_Os02g15350	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
LOC_Os03g07360.1	CDF3, LOC_Os03g07360	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
LOC_Os03g60630.1	LOC_Os03g60630	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
LOC_Os05g02150.1	OBP3, LOC_Os05g02150	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Len_g14959	OBP3	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
MA_18267g0010	HCA2, DOF5.6	transcription factor (DOF)	0.11	OrthoFinder output from all 47 species
MA_2430g0010	CDF3	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_459791g0010	TMO6	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species
MA_74014g0010	No alias	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Mp1g18540.1	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Msp_g31889	No alias	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g06748	TMO6	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g17090	CDF3	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g25217	OBP4	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g38623	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g42354	ADOF1, DOF1	transcription factor *(DOF) & original description: none	0.05	OrthoFinder output from all 47 species
Pir_g10327	No alias	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g28908	TMO6	transcription factor *(DOF) & original description: none	0.06	OrthoFinder output from all 47 species
Solyc02g077960.3.1	TMO6, Solyc02g077960	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Solyc02g090220.3.1	OBP1, Solyc02g090220	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Solyc03g112930.3.1	HCA2, DOF5.6,...	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Solyc03g115940.4.1	CDF3, Solyc03g115940	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Solyc03g121400.1.1	ADOF2, DOF2,...	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Solyc06g076030.3.1	Solyc06g076030	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Solyc09g010680.3.1	Solyc09g010680	transcription factor (DOF)	0.05	OrthoFinder output from all 47 species
Solyc10g086440.2.1	DOF2.4,...	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species
Solyc11g066050.1.1	Solyc11g066050	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Spa_g23792	No alias	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g20763	CDF3	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e004809_P001	CDF3, Zm00001e004809	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Zm00001e006190_P001	Zm00001e006190	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Zm00001e006527_P001	Zm00001e006527	transcription factor (DOF)	0.06	OrthoFinder output from all 47 species
Zm00001e012824_P001	CDF1, Zm00001e012824	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Zm00001e015414_P004	Zm00001e015414	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species
Zm00001e015597_P001	HCA2, DOF5.6,...	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Zm00001e019172_P001	Zm00001e019172	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species
Zm00001e023218_P004	Zm00001e023218	transcription factor (DOF)	0.06	OrthoFinder output from all 47 species
Zm00001e027411_P001	Zm00001e027411	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species
Zm00001e031750_P001	Zm00001e031750	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Zm00001e035074_P001	TMO6, Zm00001e035074	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Zm00001e041444_P001	Zm00001e041444	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	64	120

External Links

No external refs found!

GSVIVT01024986001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation