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  5. GSVIVT01024546001

GSVIVT01024546001 (UBC10)


Aliases : UBC10

Description : Protein degradation.peptide tagging.Membrane-anchored-Ubiquitin (MUB)-anchor addition.UBC-subclass-6 conjugation E2 protein


Gene families : OG0000200 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000200_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01024546001
Cluster HCCA: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
AT1G64230 UBC28 ubiquitin-conjugating enzyme 28 0.03 OrthoFinder output from all 47 species
Als_g23200 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0046.g030220 UBC37 not classified & original description: CDS=43-1539 0.05 OrthoFinder output from all 47 species
Azfi_s0072.g037025 No alias not classified & original description: CDS=391-633 0.03 OrthoFinder output from all 47 species
Azfi_s0155.g053654 UBC9 E2 MUB ubiquitin-conjugating enzyme & original... 0.02 OrthoFinder output from all 47 species
Ehy_g04269 ATUBC8, UBC8 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g14159 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g25993 ATUBC11, UBC11 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Smo228916 UBC9 Protein degradation.peptide... 0.05 OrthoFinder output from all 47 species
Solyc12g056100.3.1 UBC9, Solyc12g056100 conjugation E2 protein 0.04 OrthoFinder output from all 47 species
Spa_g24617 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e010614_P001 EMB144, CIN4,... E2 conjugating component COP10 of COP10-DET1 (CDD) subcomplex 0.03 OrthoFinder output from all 47 species
Zm00001e027303_P001 ATUBC11, UBC11,... conjugation E2 protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 5 141
No external refs found!