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  5. GSVIVT01024445001

GSVIVT01024445001


Description : Chromatin organisation.histone modifications.histone lysine methylation/demethylation.PRC2 histone methylation complex.associated protein factors.PWO histone H3 methylation reader


Gene families : OG0002361 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002361_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01024445001

Target Alias Description ECC score Gene Family Method Actions
AT3G03140 No alias Tudor/PWWP/MBT superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G21295 No alias Tudor/PWWP/MBT superfamily protein 0.03 OrthoFinder output from all 47 species
Aev_g01591 No alias histone H3 methylation reader (PWO) of PRC2 histone... 0.06 OrthoFinder output from all 47 species
Aob_g06752 No alias histone H3 methylation reader (PWO) of PRC2 histone... 0.06 OrthoFinder output from all 47 species
Aop_g02608 No alias histone H3 methylation reader (PWO) of PRC2 histone... 0.02 OrthoFinder output from all 47 species
Aspi01Gene19699.t1 Aspi01Gene19699 histone H3 methylation reader (PWO) of PRC2 histone... 0.03 OrthoFinder output from all 47 species
Azfi_s0073.g037160 No alias histone H3 methylation reader (PWO) of PRC2 histone... 0.04 OrthoFinder output from all 47 species
Ceric.02G093600.1 Ceric.02G093600 histone H3 methylation reader (PWO) of PRC2 histone... 0.1 OrthoFinder output from all 47 species
Ceric.26G018500.1 Ceric.26G018500 histone H3 methylation reader (PWO) of PRC2 histone... 0.06 OrthoFinder output from all 47 species
Dcu_g09139 No alias histone H3 methylation reader (PWO) of PRC2 histone... 0.06 OrthoFinder output from all 47 species
Dcu_g22383 No alias histone H3 methylation reader (PWO) of PRC2 histone... 0.06 OrthoFinder output from all 47 species
LOC_Os02g47170.1 LOC_Os02g47170 histone H3 methylation reader (PWO) 0.03 OrthoFinder output from all 47 species
Len_g22550 No alias histone H3 methylation reader (PWO) of PRC2 histone... 0.02 OrthoFinder output from all 47 species
Lfl_g02123 No alias histone H3 methylation reader (PWO) of PRC2 histone... 0.02 OrthoFinder output from all 47 species
Lfl_g02427 No alias histone H3 methylation reader (PWO) of PRC2 histone... 0.05 OrthoFinder output from all 47 species
MA_10437259g0020 No alias histone H3 methylation reader (PWO) 0.04 OrthoFinder output from all 47 species
Msp_g16181 No alias histone H3 methylation reader (PWO) of PRC2 histone... 0.04 OrthoFinder output from all 47 species
Nbi_g10454 No alias histone H3 methylation reader (PWO) of PRC2 histone... 0.05 OrthoFinder output from all 47 species
Ppi_g01387 No alias histone H3 methylation reader (PWO) of PRC2 histone... 0.02 OrthoFinder output from all 47 species
Ppi_g12655 No alias histone H3 methylation reader (PWO) of PRC2 histone... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008070 No alias histone H3 methylation reader (PWO) of PRC2 histone... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0059.g015113 No alias histone H3 methylation reader (PWO) of PRC2 histone... 0.03 OrthoFinder output from all 47 species
Sam_g10571 No alias histone H3 methylation reader (PWO) of PRC2 histone... 0.04 OrthoFinder output from all 47 species
Solyc03g096880.4.1 Solyc03g096880 histone H3 methylation reader (PWO) 0.02 OrthoFinder output from all 47 species
Spa_g47109 No alias histone H3 methylation reader (PWO) of PRC2 histone... 0.03 OrthoFinder output from all 47 species
Tin_g12832 No alias histone H3 methylation reader (PWO) of PRC2 histone... 0.03 OrthoFinder output from all 47 species
Zm00001e020715_P001 Zm00001e020715 histone H3 methylation reader (PWO) 0.03 OrthoFinder output from all 47 species
Zm00001e023309_P002 Zm00001e023309 histone H3 methylation reader (PWO) 0.03 OrthoFinder output from all 47 species
Zm00001e026683_P002 Zm00001e026683 histone H3 methylation reader (PWO) 0.03 OrthoFinder output from all 47 species
Zm00001e027733_P004 Zm00001e027733 histone H3 methylation reader (PWO) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0004559 alpha-mannosidase activity IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006013 mannose metabolic process IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
MF GO:0015923 mannosidase activity IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
BP GO:0032012 regulation of ARF protein signal transduction IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0046578 regulation of Ras protein signal transduction IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR000313 PWWP_dom 12 91
No external refs found!