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Aliases : CDT1, ATCDT1A, CDT1A
Description : Cell cycle.interphase.DNA replication.preinitiation.CDT1 helicase auxiliary factor
Gene families : OG0007109 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007109_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01024251001 | |
| Cluster | HCCA: Cluster_85 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00171p00068790 | CDT1, ATCDT1A,... | Cell cycle.interphase.DNA replication.preinitiation.CDT1... | 0.16 | OrthoFinder output from all 47 species | |
| AT2G31270 | CDT1, ATCDT1A, CDT1A | homolog of yeast CDT1 A | 0.03 | OrthoFinder output from all 47 species | |
| AT3G54710 | CDT1B, CDT1, ATCDT1B | homolog of yeast CDT1 B homolog of yeast CDT1 B | 0.05 | OrthoFinder output from all 47 species | |
| Als_g51251 | CDT1, ATCDT1A, CDT1A | helicase auxiliary factor *(CDT1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g05243 | CDT1, ATCDT1A, CDT1A | helicase auxiliary factor *(CDT1) & original description: none | 0.1 | OrthoFinder output from all 47 species | |
| Aspi01Gene66565.t1 | CDT1, ATCDT1A,... | helicase auxiliary factor *(CDT1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.1Z001200.1 | CDT1, ATCDT1A,... | helicase auxiliary factor *(CDT1) & original... | 0.07 | OrthoFinder output from all 47 species | |
| Cre03.g163300 | No alias | Cell cycle.interphase.DNA replication.preinitiation.CDT1... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_04601 | CDT1, ATCDT1A, CDT1A | helicase auxiliary factor (CDT1) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os04g10650.1 | CDT1, ATCDT1A,... | helicase auxiliary factor (CDT1) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os10g34820.2 | CDT1, ATCDT1A,... | helicase auxiliary factor (CDT1) | 0.1 | OrthoFinder output from all 47 species | |
| MA_114779g0010 | CDT1B, CDT1, ATCDT1B | helicase auxiliary factor (CDT1) | 0.07 | OrthoFinder output from all 47 species | |
| MA_9011g0010 | CDT1, ATCDT1A, CDT1A | helicase auxiliary factor (CDT1) | 0.1 | OrthoFinder output from all 47 species | |
| Mp5g09070.1 | CDT1, ATCDT1A, CDT1A | helicase auxiliary factor (CDT1) | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0001.g000487 | CDT1, ATCDT1A, CDT1A | helicase auxiliary factor *(CDT1) & original... | 0.07 | OrthoFinder output from all 47 species | |
| Sam_g27532 | No alias | helicase auxiliary factor *(CDT1) & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Smo403930 | CDT1, ATCDT1A, CDT1A | Cell cycle.interphase.DNA replication.preinitiation.CDT1... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g019960.3.1 | CDT1, ATCDT1A,... | helicase auxiliary factor (CDT1) | 0.12 | OrthoFinder output from all 47 species | |
| Solyc06g008510.3.1 | CDT1, ATCDT1A,... | helicase auxiliary factor (CDT1) | 0.11 | OrthoFinder output from all 47 species | |
| Zm00001e004505_P001 | CDT1, ATCDT1A,... | helicase auxiliary factor (CDT1) | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e036500_P001 | CDT1, ATCDT1A,... | helicase auxiliary factor (CDT1) | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e041798_P001 | CDT1, ATCDT1A,... | helicase auxiliary factor (CDT1) | 0.13 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| CC | GO:0000796 | condensin complex | IEP | HCCA |
| MF | GO:0003774 | cytoskeletal motor activity | IEP | HCCA |
| MF | GO:0003777 | microtubule motor activity | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| CC | GO:0005694 | chromosome | IEP | HCCA |
| BP | GO:0006996 | organelle organization | IEP | HCCA |
| BP | GO:0007017 | microtubule-based process | IEP | HCCA |
| BP | GO:0007018 | microtubule-based movement | IEP | HCCA |
| BP | GO:0007076 | mitotic chromosome condensation | IEP | HCCA |
| MF | GO:0008017 | microtubule binding | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| MF | GO:0015631 | tubulin binding | IEP | HCCA |
| BP | GO:0016043 | cellular component organization | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| BP | GO:0022402 | cell cycle process | IEP | HCCA |
| BP | GO:0030261 | chromosome condensation | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| CC | GO:0044815 | DNA packaging complex | IEP | HCCA |
| BP | GO:0051276 | chromosome organization | IEP | HCCA |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1903047 | mitotic cell cycle process | IEP | HCCA |
| No external refs found! |