Aliases : SHI
Description : RNA biosynthesis.transcriptional activation.SRS transcription factor
Gene families : OG0001235 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001235_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: GSVIVT01024206001 | |
Cluster | HCCA: Cluster_23 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00063p00161200 | LRP1,... | RNA biosynthesis.transcriptional activation.SRS... | 0.03 | OrthoFinder output from all 47 species | |
AT1G19790 | SRS7 | SHI-related sequence 7 | 0.04 | OrthoFinder output from all 47 species | |
AT2G21400 | SRS3 | SHI-related sequence3 | 0.04 | OrthoFinder output from all 47 species | |
AT3G51060 | SRS1, STY1 | Lateral root primordium (LRP) protein-related | 0.05 | OrthoFinder output from all 47 species | |
AT4G36260 | SRS2, STY2 | Lateral root primordium (LRP) protein-related | 0.03 | OrthoFinder output from all 47 species | |
AT5G12330 | LRP1 | Lateral root primordium (LRP) protein-related | 0.03 | OrthoFinder output from all 47 species | |
Adi_g061023 | SHI | SRS-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Adi_g079607 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aspi01Gene65745.t1 | SHI, Aspi01Gene65745 | SRS-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Azfi_s0065.g035783 | SHI | SRS-type transcription factor & original description: CDS=1-2148 | 0.02 | OrthoFinder output from all 47 species | |
Azfi_s0092.g043005 | SRS5 | SRS-type transcription factor & original description: CDS=39-1118 | 0.02 | OrthoFinder output from all 47 species | |
Azfi_s0861.g090073 | SHI | SRS-type transcription factor & original description:... | 0.02 | OrthoFinder output from all 47 species | |
Ceric.25G035200.1 | SRS1, STY1,... | SRS-type transcription factor & original description:... | 0.02 | OrthoFinder output from all 47 species | |
Ceric.32G058400.1 | SRS1, STY1,... | SRS-type transcription factor & original description:... | 0.04 | OrthoFinder output from all 47 species | |
Dac_g13440 | SHI | SRS-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Dcu_g08256 | SHI | SRS-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Dcu_g16665 | SRS1, STY1 | SRS-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Dcu_g40676 | SHI | SRS-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Dde_g30563 | SHI | SRS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dde_g47477 | SHI | SRS-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Ehy_g21838 | SRS1, STY1 | SRS-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01009812001 | SRS5 | RNA biosynthesis.transcriptional activation.SRS... | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os01g72490.1 | LRP1, LOC_Os01g72490 | transcription factor (SRS) | 0.06 | OrthoFinder output from all 47 species | |
Lfl_g25627 | SHI | SRS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
MA_2299g0010 | LRP1 | transcription factor (SRS) | 0.04 | OrthoFinder output from all 47 species | |
MA_53545g0010 | SRS1, STY1 | transcription factor (SRS) | 0.03 | OrthoFinder output from all 47 species | |
Mp3g19510.1 | SHI | transcription factor (SRS) | 0.05 | OrthoFinder output from all 47 species | |
Pir_g48067 | LRP1 | SRS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g14706 | SHI | SRS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0150.g023316 | SRS1, STY1 | not classified & original description: CDS=12-590 | 0.03 | OrthoFinder output from all 47 species | |
Solyc02g062400.3.1 | SRS1, STY1,... | transcription factor (SRS) | 0.04 | OrthoFinder output from all 47 species | |
Solyc10g054070.1.1 | SRS5, Solyc10g054070 | transcription factor (SRS) | 0.04 | OrthoFinder output from all 47 species | |
Spa_g50442 | SHI | SRS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Tin_g29778 | SRS1, STY1 | SRS-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Tin_g30774 | SHI | SRS-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e013256_P002 | SHI, Zm00001e013256 | transcription factor (SRS) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e024681_P001 | SHI, Zm00001e024681 | transcription factor (SRS) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e026854_P001 | SHI, Zm00001e026854 | transcription factor (SRS) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e028304_P001 | LRP1, Zm00001e028304 | transcription factor (SRS) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e030189_P001 | SHI, Zm00001e030189 | transcription factor (SRS) | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e031567_P001 | LRP1, Zm00001e031567 | transcription factor (SRS) | 0.07 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
No InterPro domains available for this sequence
No external refs found! |