GSVIVT01023471001 (UBQ10)


Aliases : UBQ10

Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ ubiquitin-fold protein


Gene families : OG0000054 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01023471001

Target Alias Description ECC score Gene Family Method Actions
AT1G31340 RUB1, ATRUB1, NEDD8 related to ubiquitin 1 0.01 OrthoFinder output from all 47 species
AT4G05050 UBQ11 ubiquitin 11 0.04 OrthoFinder output from all 47 species
AT4G05320 UBQ10 polyubiquitin 10 0.02 OrthoFinder output from all 47 species
Ala_g07703 RUB1, ATRUB1, NEDD8 RUB ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Als_g28951 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.05 OrthoFinder output from all 47 species
Als_g55811 UBQ11 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene16401.t1 UBQ10, Aspi01Gene16401 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene16403.t1 UBQ10, Aspi01Gene16403 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene23086.t1 UBQ11, Aspi01Gene23086 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene23132.t1 UBQ4, Aspi01Gene23132 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene23133.t1 UBQ4, Aspi01Gene23133 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene57838.t1 UBQ10, Aspi01Gene57838 UBQ ubiquitin-fold protein & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g15004 No alias component *(eL40) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Ceric.22G046000.1 UBQ7, RUB2,... not classified & original description: pacid=50614635... 0.02 OrthoFinder output from all 47 species
Ceric.29G037800.1 UBQ3, Ceric.29G037800 UBQ ubiquitin-fold protein & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.29G037900.1 UBQ3, Ceric.29G037900 UBQ ubiquitin-fold protein & original description:... 0.05 OrthoFinder output from all 47 species
Dac_g27240 UBQ11 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g43673 UBQ14 UBQ ubiquitin-fold protein & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g08812 No alias component *(eL40) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 47 species
Dde_g39498 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g41473 UBQ14 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g50341 UBQ14 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Gb_02030 UBQ10 ubiquitin-fold protein (UBQ) 0.05 OrthoFinder output from all 47 species
Gb_07386 UBQ4 ubiquitin-fold protein (UBQ) 0.03 OrthoFinder output from all 47 species
Gb_35273 UBQ10 ubiquitin-fold protein (UBQ) 0.04 OrthoFinder output from all 47 species
LOC_Os10g39590.1 LOC_Os10g39590 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Len_g29367 UBQ14 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Len_g29368 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g22941 UBQ11 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g23365 UBQ6 component *(eS31) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 47 species
MA_371071g0010 UBQ14 ubiquitin-fold protein (UBQ) 0.05 OrthoFinder output from all 47 species
MA_41251g0030 UBQ10 ubiquitin-fold protein (UBQ) 0.03 OrthoFinder output from all 47 species
Mp4g02740.1 UBQ10 ubiquitin-fold protein (UBQ) 0.03 OrthoFinder output from all 47 species
Msp_g43028 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g02100 RUB1, ATRUB1, NEDD8 RUB ubiquitin-fold protein & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g02418 No alias component *(eL40) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 47 species
Pir_g08617 No alias component *(eL40) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 47 species
Pnu_g02303 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g26810 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g36052 No alias UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g08748 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g12172 RUB1, ATRUB1, NEDD8 RUB ubiquitin-fold protein & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g53872 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g17745 UBQ11 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g46317 UBQ11 UBQ ubiquiTin-fold protein & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e034164_P001 RUB1, ATRUB1,... ubiquitin-fold protein (RUB) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000626 Ubiquitin-like_dom 196 267
IPR000626 Ubiquitin-like_dom 44 115
IPR000626 Ubiquitin-like_dom 14 39
IPR000626 Ubiquitin-like_dom 640 711
IPR000626 Ubiquitin-like_dom 488 559
IPR000626 Ubiquitin-like_dom 729 763
IPR000626 Ubiquitin-like_dom 272 343
IPR000626 Ubiquitin-like_dom 120 191
IPR000626 Ubiquitin-like_dom 564 635
IPR000626 Ubiquitin-like_dom 412 483
No external refs found!