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  5. GSVIVT01023248001

GSVIVT01023248001 (ECT11)


Aliases : ECT11

No description available


Gene families : OG0000330 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000330_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01023248001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00096p00085490 ECT7,... No description available 0.03 OrthoFinder output from all 47 species
Adi_g105413 ECT5 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g10957 ECT2 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g06040 ECT5 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene08484.t1 ECT5, Aspi01Gene08484 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene52931.t1 ECT8, Aspi01Gene52931 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0292.g063379 ECT8 methylation reader *(ECT) & original description: CDS=633-2507 0.03 OrthoFinder output from all 47 species
Cba_g20530 ECT8 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g17655 ECT8 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g22630.1 ECT7, LOC_Os01g22630 methylation reader (ECT) 0.02 OrthoFinder output from all 47 species
Lfl_g31262 ECT7 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g35611 ECT8 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g26733 ECT5 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003691 ECT8 methylation reader *(ECT) & original description: CDS=367-2349 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006035 ECT8 methylation reader *(ECT) & original description: CDS=18-1823 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP HCCA
BP GO:0002098 tRNA wobble uridine modification IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008378 galactosyltransferase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
CC GO:0030880 RNA polymerase complex IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033588 elongator holoenzyme complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR007275 YTH_domain 457 598
No external refs found!