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  5. GSVIVT01023233001

GSVIVT01023233001


Description : Prolycopene isomerase, chloroplastic OS=Daucus carota


Gene families : OG0002889 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002889_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01023233001
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
AT1G57770 No alias FAD/NAD(P)-binding oxidoreductase family protein 0.07 OrthoFinder output from all 47 species
Aev_g49491 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g06469 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g00730 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0026.g023399 No alias not classified & original description: CDS=135-2003 0.04 OrthoFinder output from all 47 species
Cba_g27219 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001258.10 No alias No description available 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020723.8 No alias No description available 0.01 OrthoFinder output from all 47 species
Cre09.g407200 No alias Prolycopene isomerase, chloroplastic OS=Solanum lycopersicum 0.06 OrthoFinder output from all 47 species
Dcu_g10069 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g14193 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_39487 No alias Prolycopene isomerase, chloroplastic OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os03g62510.1 LOC_Os03g62510 Prolycopene isomerase, chloroplastic OS=Daucus carota... 0.04 OrthoFinder output from all 47 species
MA_10428660g0010 No alias Prolycopene isomerase 1, chloroplastic OS=Oncidium... 0.02 OrthoFinder output from all 47 species
Ppi_g10834 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0128.g021866 No alias not classified & original description: CDS=168-1886 0.02 OrthoFinder output from all 47 species
Solyc05g010180.4.1 Solyc05g010180 Prolycopene isomerase, chloroplastic OS=Daucus carota... 0.08 OrthoFinder output from all 47 species
Zm00001e011669_P002 Zm00001e011669 Prolycopene isomerase, chloroplastic OS=Daucus carota... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002937 Amino_oxidase 58 554
No external refs found!