GSVIVT01023225001 (ATRABA2A, ATRAB11C,...)

Aliases : ATRABA2A, ATRAB11C, ATRAB-A2A, RAB-A2A, RAB11c

Description : Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase activities.A-class RAB GTPase

Gene families : OG0000247 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000247_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01023225001

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00165p00060220	RAB-A2C,...	Vesicle trafficking.regulation of membrane tethering and...	0.04	OrthoFinder output from all 47 species
AT1G09630	ATRABA2A,...	RAB GTPase 11C	0.03	OrthoFinder output from all 47 species
Adi_g077469	ATRABA5C, ARA4,...	A-class RAB GTPase & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g04605	AtRABA1f, RABA1f	A-class RAB GTPase & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g18147	AtRABA1f, RABA1f	A-class RAB GTPase & original description: none	0.06	OrthoFinder output from all 47 species
Aev_g31350	AtRABA1f, RABA1f	A-class RAB GTPase & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g30591	RABA2b,...	A-class RAB GTPase & original description: none	0.03	OrthoFinder output from all 47 species
Als_g03446	ATRABA5C, ARA4,...	A-class RAB GTPase & original description: none	0.03	OrthoFinder output from all 47 species
Als_g08482	AtRABA1f, RABA1f	A-class RAB GTPase & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g20651	AtRABA1f, RABA1f	A-class RAB GTPase & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g01569	AtRABA5a, RABA5a	A-class RAB GTPase & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g01612	RABA2b,...	A-class RAB GTPase & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g22467	ATRABA5C, ARA4,...	A-class RAB GTPase & original description: none	0.04	OrthoFinder output from all 47 species
Ceric.16G022800.1	AtRABA1f,...	A-class RAB GTPase & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.32G069500.1	AtRABA1f,...	A-class RAB GTPase & original description:...	0.03	OrthoFinder output from all 47 species
Dac_g04872	AtRABA5a, RABA5a	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g03700	ARA-1, ATRABA5E,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g08021	AtRABA1f, RABA1f	A-class RAB GTPase & original description: none	0.06	OrthoFinder output from all 47 species
Dcu_g40522	ATRABA2A,...	A-class RAB GTPase & original description: none	0.05	OrthoFinder output from all 47 species
Ehy_g00471	ATRABA5C, ARA4,...	A-class RAB GTPase & original description: none	0.03	OrthoFinder output from all 47 species
LOC_Os03g60870.1	RABA2b,...	A-class RAB GTPase	0.03	OrthoFinder output from all 47 species
LOC_Os05g20050.1	RAB-A2C,...	A-class RAB GTPase	0.03	OrthoFinder output from all 47 species
Len_g03672	AtRABA1f, RABA1f	A-class RAB GTPase & original description: none	0.04	OrthoFinder output from all 47 species
MA_15386g0010	AtRABA1f, RABA1f	A-class RAB GTPase	0.02	OrthoFinder output from all 47 species
MpVg00760.1	AtRABA1f, RABA1f	No annotation	0.03	OrthoFinder output from all 47 species
Msp_g09974	ATRABA5C, ARA4,...	A-class RAB GTPase & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g39136	AtRABA1f, RABA1f	A-class RAB GTPase & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g04295	AtRABA5b, RABA5b	A-class RAB GTPase & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g15032	AtRABA1f, RABA1f	A-class RAB GTPase & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g32412	AtRABA5a, RABA5a	A-class RAB GTPase & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g07298	AtRABA1f, RABA1f	A-class RAB GTPase & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0034.g011299	AtRABA1f, RABA1f	A-class RAB GTPase & original description: CDS=186-836	0.03	OrthoFinder output from all 47 species
Smo146310	AtRABA1f, RABA1f	Vesicle trafficking.regulation of membrane tethering and...	0.03	OrthoFinder output from all 47 species
Solyc09g098170.4.1	AtRABA5d,...	A-class RAB GTPase	0.07	OrthoFinder output from all 47 species
Solyc10g045550.2.1	ATRABA2A,...	A-class RAB GTPase	0.07	OrthoFinder output from all 47 species
Spa_g16289	ATRABA2A,...	A-class RAB GTPase & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e009700_P001	AtRABA1f,...	A-class RAB GTPase	0.03	OrthoFinder output from all 47 species
Zm00001e031368_P002	RAB-A2C,...	A-class RAB GTPase	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004129	cytochrome-c oxidase activity	IEP	HCCA
MF	GO:0005215	transporter activity	IEP	HCCA
MF	GO:0005319	lipid transporter activity	IEP	HCCA
CC	GO:0005737	cytoplasm	IEP	HCCA
CC	GO:0005740	mitochondrial envelope	IEP	HCCA
BP	GO:0006352	DNA-templated transcription initiation	IEP	HCCA
BP	GO:0006367	transcription initiation at RNA polymerase II promoter	IEP	HCCA
BP	GO:0006869	lipid transport	IEP	HCCA
MF	GO:0015078	proton transmembrane transporter activity	IEP	HCCA
MF	GO:0015399	primary active transmembrane transporter activity	IEP	HCCA
MF	GO:0015453	oxidoreduction-driven active transmembrane transporter activity	IEP	HCCA
MF	GO:0016675	oxidoreductase activity, acting on a heme group of donors	IEP	HCCA
MF	GO:0022853	active monoatomic ion transmembrane transporter activity	IEP	HCCA
CC	GO:0031967	organelle envelope	IEP	HCCA
CC	GO:0031975	envelope	IEP	HCCA
BP	GO:0061024	membrane organization	IEP	HCCA
CC	GO:0110165	cellular anatomical entity	IEP	HCCA
BP	GO:0120009	intermembrane lipid transfer	IEP	HCCA
MF	GO:0120013	lipid transfer activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001806	Small_GTPase	14	174

External Links

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GSVIVT01023225001 (ATRABA2A, ATRAB11C,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation