GSVIVT01022963001

Description : Putative disease resistance RPP13-like protein 1 OS=Arabidopsis thaliana

Gene families : OG0000694 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000694_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01022963001

Target	Alias	Description	ECC score	Gene Family Method
GSVIVT01000634001	No alias	Putative disease resistance protein RGA4 OS=Solanum bulbocastanum	0.05	OrthoFinder output from all 47 species
GSVIVT01000635001	No alias	Putative disease resistance RPP13-like protein 1...	0.1	OrthoFinder output from all 47 species
GSVIVT01000656001	HRT, RCY1, RPP8	Putative disease resistance protein At3g14460...	0.04	OrthoFinder output from all 47 species
GSVIVT01000663001	No alias	Putative disease resistance protein At3g14460...	0.09	OrthoFinder output from all 47 species
GSVIVT01001453001	No alias	Putative disease resistance RPP13-like protein 1...	0.05	OrthoFinder output from all 47 species
GSVIVT01001457001	No alias	Putative disease resistance RPP13-like protein 1...	0.07	OrthoFinder output from all 47 species
GSVIVT01001459001	No alias	Putative disease resistance RPP13-like protein 1...	0.06	OrthoFinder output from all 47 species
GSVIVT01004021001	No alias	Putative disease resistance RPP13-like protein 1...	0.08	OrthoFinder output from all 47 species
GSVIVT01005316001	No alias	Putative disease resistance RPP13-like protein 1...	0.04	OrthoFinder output from all 47 species
GSVIVT01005320001	No alias	Putative disease resistance RPP13-like protein 1...	0.04	OrthoFinder output from all 47 species
GSVIVT01006243001	No alias	Putative disease resistance protein At3g14460...	0.03	OrthoFinder output from all 47 species
GSVIVT01012407001	No alias	Putative disease resistance RPP13-like protein 1...	0.07	OrthoFinder output from all 47 species
GSVIVT01013307001	No alias	Putative disease resistance RPP13-like protein 1...	0.08	OrthoFinder output from all 47 species
GSVIVT01013310001	No alias	Putative disease resistance RPP13-like protein 1...	0.05	OrthoFinder output from all 47 species
GSVIVT01022829001	No alias	Putative disease resistance RPP13-like protein 1...	0.07	OrthoFinder output from all 47 species
GSVIVT01022832001	No alias	Putative disease resistance protein At3g14460...	0.04	OrthoFinder output from all 47 species
GSVIVT01022941001	No alias	Putative disease resistance RPP13-like protein 1...	0.07	OrthoFinder output from all 47 species
GSVIVT01022947001	No alias	Putative disease resistance RPP13-like protein 1...	0.08	OrthoFinder output from all 47 species
GSVIVT01023015001	No alias	Putative disease resistance RPP13-like protein 1...	0.04	OrthoFinder output from all 47 species
GSVIVT01023312001	No alias	Putative disease resistance RPP13-like protein 1...	0.06	OrthoFinder output from all 47 species
GSVIVT01031991001	No alias	Putative disease resistance RPP13-like protein 1...	0.05	OrthoFinder output from all 47 species
GSVIVT01032169001	No alias	Putative disease resistance RPP13-like protein 1...	0.07	OrthoFinder output from all 47 species
GSVIVT01036628001	RPM1, RPS3	Putative disease resistance RPP13-like protein 1...	0.09	OrthoFinder output from all 47 species
GSVIVT01036767001	No alias	Putative disease resistance RPP13-like protein 1...	0.1	OrthoFinder output from all 47 species
LOC_Os11g29110.1	LOC_Os11g29110	Putative disease resistance protein RGA4 OS=Solanum...	0.03	OrthoFinder output from all 47 species
Solyc11g071420.3.1	Solyc11g071420	Putative disease resistance RPP13-like protein 1...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003924	GTPase activity	IEP	HCCA
MF	GO:0005525	GTP binding	IEP	HCCA
MF	GO:0016462	pyrophosphatase activity	IEP	HCCA
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	HCCA
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	HCCA
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	IEP	HCCA
MF	GO:0019001	guanyl nucleotide binding	IEP	HCCA
MF	GO:0032561	guanyl ribonucleotide binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	281	419
IPR002182	NB-ARC	231	274

External Links

No external refs found!

GSVIVT01022963001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation