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Description : Pentatricopeptide repeat-containing protein At1g10910, chloroplastic OS=Arabidopsis thaliana
Gene families : OG0007769 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007769_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00136p00085920 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At1g10910,... | 0.11 | OrthoFinder output from all 47 species | |
| AT1G10910 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g042744 | No alias | RNA editing factor *(PDM2) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g083413 | No alias | RNA editing factor *(PDM2) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g17655 | No alias | RNA editing factor *(PDM2) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g00767 | No alias | RNA editing factor *(PDM2) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g02683 | No alias | RNA editing factor *(PDM2) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.11G067700.1 | Ceric.11G067700 | RNA editing factor *(PDM2) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g05612 | No alias | RNA editing factor *(PDM2) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g37870.4 | LOC_Os01g37870 | Pentatricopeptide repeat-containing protein At1g10910,... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g08792 | No alias | RNA editing factor *(PDM2) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g08793 | No alias | RNA editing factor *(PDM2) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Lfl_g15917 | No alias | RNA editing factor *(PDM2) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_316275g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| MA_92401g0010 | No alias | Pentatricopeptide repeat-containing protein At1g10910,... | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g10433 | No alias | RNA editing factor *(PDM2) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g10589 | No alias | RNA editing factor *(PDM2) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0141.g022758 | No alias | RNA editing factor *(PDM2) & original description: CDS=659-2260 | 0.04 | OrthoFinder output from all 47 species | |
| Solyc11g040260.2.1 | Solyc11g040260 | Pentatricopeptide repeat-containing protein At1g10910,... | 0.08 | OrthoFinder output from all 47 species | |
| Spa_g04732 | No alias | RNA editing factor *(PDM2) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e020710_P002 | Zm00001e020710 | Pentatricopeptide repeat-containing protein At1g10910,... | 0.07 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
| MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| No external refs found! |