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  5. GSVIVT01022812001

GSVIVT01022812001


Description : Cellular respiration.oxidative phosphorylation.alternative NAD(P)H dehydrogenase activities.alternative oxidase


Gene families : OG0001050 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001050_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01022812001

Target Alias Description ECC score Gene Family Method Actions
AT1G32350 AOX1D alternative oxidase 1D 0.04 OrthoFinder output from all 47 species
AT3G22370 ATAOX1A, AOX1A alternative oxidase 1A 0.03 OrthoFinder output from all 47 species
AT5G64210 AOX2 alternative oxidase 2 0.06 OrthoFinder output from all 47 species
Adi_g074537 ATAOX1A, AOX1A alternative oxidase *(AOx) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g02184 ATAOX1A, AOX1A alternative oxidase *(AOx) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g26901 ATAOX1A, AOX1A alternative oxidase *(AOx) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene16588.t1 ATAOX1A, AOX1A,... alternative oxidase *(AOx) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g68820 ATAOX1A, AOX1A alternative oxidase *(AOx) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.06G017700.1 ATAOX1A, AOX1A,... alternative oxidase *(AOx) & original description:... 0.05 OrthoFinder output from all 47 species
Dac_g43930 ATAOX1A, AOX1A alternative oxidase *(AOx) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g48125 AOX1D alternative oxidase *(AOx) & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g04394 ATAOX1A, AOX1A alternative oxidase *(AOx) & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os04g51150.1 ATAOX1A, AOX1A,... alternative oxidase (AOx) 0.04 OrthoFinder output from all 47 species
LOC_Os04g51160.1 AOX1B, LOC_Os04g51160 alternative oxidase (AOx) 0.05 OrthoFinder output from all 47 species
Len_g15899 ATAOX1A, AOX1A alternative oxidase *(AOx) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10426944g0010 AOX1B alternative oxidase (AOx) 0.05 OrthoFinder output from all 47 species
MA_10430050g0010 ATAOX1A, AOX1A alternative oxidase (AOx) 0.03 OrthoFinder output from all 47 species
Nbi_g17024 AOX1D alternative oxidase *(AOx) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g29565 ATAOX1A, AOX1A alternative oxidase *(AOx) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05078 ATAOX1A, AOX1A alternative oxidase *(AOx) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g55824 AOX1D alternative oxidase *(AOx) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0025.g009326 ATAOX1A, AOX1A alternative oxidase *(AOx) & original description: CDS=55-1446 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0183.g024936 ATAOX1A, AOX1A alternative oxidase *(AOx) & original description: CDS=224-1213 0.03 OrthoFinder output from all 47 species
Sam_g11108 No alias alternative oxidase *(AOx) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc08g075550.4.1 AOX1D, Solyc08g075550 alternative oxidase (AOx) 0.03 OrthoFinder output from all 47 species
Tin_g14659 ATAOX1A, AOX1A alternative oxidase *(AOx) & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e007056_P001 ATAOX1A, AOX1A,... alternative oxidase (AOx) 0.04 OrthoFinder output from all 47 species
Zm00001e007057_P002 AOX1C, Zm00001e007057 alternative oxidase (AOx) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0009916 alternative oxidase activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0008375 acetylglucosaminyltransferase activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
CC GO:0030286 dynein complex IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051259 protein complex oligomerization IEP HCCA
BP GO:0051260 protein homooligomerization IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002680 AOX 112 303
No external refs found!