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  5. GSVIVT01022464001

GSVIVT01022464001


Description : Binding partner of ACD11 1 OS=Arabidopsis thaliana


Gene families : OG0000642 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000642_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01022464001

Target Alias Description ECC score Gene Family Method Actions
AT5G16840 BPA1 binding partner of acd11 1 0.03 OrthoFinder output from all 47 species
Adi_g022185 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0130.g049026 No alias not classified & original description: CDS=251-1009 0.08 OrthoFinder output from all 47 species
Cba_g14713 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g13809 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g07449 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g23747 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g04417 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19804 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g50560.1 LOC_Os03g50560 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os03g53770.1 LOC_Os03g53770 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Len_g55926 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03642 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g07946 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g11240 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c19_9760V3.1 Pp3c19_9760 RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 OrthoFinder output from all 47 species
Pp3c22_22390V3.1 Pp3c22_22390 RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0164.g024053 No alias not classified & original description: CDS=195-929 0.04 OrthoFinder output from all 47 species
Sam_g11660 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g072770.3.1 Solyc06g072770 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc08g076530.3.1 Solyc08g076530 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Tin_g28029 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 9 68
No external refs found!