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  5. GSVIVT01022350001

GSVIVT01022350001


Description : RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.tail module.MED15 component


Gene families : OG0001744 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001744_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01022350001

Target Alias Description ECC score Gene Family Method Actions
Als_g27483 No alias component *(MED15) of tail module of MEDIATOR... 0.04 OrthoFinder output from all 47 species
Als_g54963 No alias component *(MED15) of tail module of MEDIATOR... 0.03 OrthoFinder output from all 47 species
Aspi01Gene18282.t1 Aspi01Gene18282 component *(MED15) of tail module of MEDIATOR... 0.03 OrthoFinder output from all 47 species
Cba_g04065 No alias component *(MED15) of tail module of MEDIATOR... 0.02 OrthoFinder output from all 47 species
Dcu_g41356 No alias component *(MED15) of tail module of MEDIATOR... 0.03 OrthoFinder output from all 47 species
GSVIVT01025805001 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.02 OrthoFinder output from all 47 species
Gb_13858 No alias component MED15 of tail module of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
MA_10425757g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_10425998g0010 No alias component MED15 of tail module of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!