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  5. GSVIVT01022264001

GSVIVT01022264001


No description available


Gene families : OG0003489 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003489_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01022264001
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
AT1G66810 No alias Zinc finger C-x8-C-x5-C-x3-H type family protein 0.02 OrthoFinder output from all 47 species
Ceric.06G081500.1 Ceric.06G081500 regulatory protein of RNA homeostasis & original... 0.06 OrthoFinder output from all 47 species
GSVIVT01030969001 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.05 OrthoFinder output from all 47 species
LOC_Os01g45730.1 LOC_Os01g45730 C3H zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Msp_g33323 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo112852 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.01 OrthoFinder output from all 47 species
Solyc05g008670.3.1 Solyc05g008670 C3H zinc finger transcription factor 0.05 OrthoFinder output from all 47 species
Spa_g48187 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e032502_P003 Zm00001e032502 C3H zinc finger transcription factor 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006873 cellular monoatomic ion homeostasis IEP HCCA
BP GO:0006875 cellular metal ion homeostasis IEP HCCA
BP GO:0006879 cellular iron ion homeostasis IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008199 ferric iron binding IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
BP GO:0030003 cellular monoatomic cation homeostasis IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
BP GO:0046916 cellular transition metal ion homeostasis IEP HCCA
BP GO:0048878 chemical homeostasis IEP HCCA
BP GO:0050801 monoatomic ion homeostasis IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0055065 metal ion homeostasis IEP HCCA
BP GO:0055072 iron ion homeostasis IEP HCCA
BP GO:0055076 transition metal ion homeostasis IEP HCCA
BP GO:0055080 monoatomic cation homeostasis IEP HCCA
BP GO:0055082 cellular chemical homeostasis IEP HCCA
BP GO:0098771 inorganic ion homeostasis IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 9 29
No external refs found!