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  5. GSVIVT01022083001

GSVIVT01022083001


Description : Protein degradation.ER-associated protein degradation (ERAD) machinery.Doa10 ubiquitin ligase component


Gene families : OG0001940 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001940_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01022083001

Target Alias Description ECC score Gene Family Method Actions
Adi_g050431 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g27804 No alias E3 ubiquitin ligase component *(Doa10) of ER-associated... 0.02 OrthoFinder output from all 47 species
Dcu_g03181 No alias E3 ubiquitin ligase component *(Doa10) of ER-associated... 0.03 OrthoFinder output from all 47 species
Dde_g02988 No alias E3 ubiquitin ligase component *(Doa10) of ER-associated... 0.06 OrthoFinder output from all 47 species
MA_130450g0010 No alias ubiquitin ligase component Doa10 of ER-associated... 0.05 OrthoFinder output from all 47 species
Msp_g13590 No alias E3 ubiquitin ligase component *(Doa10) of ER-associated... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0071.g016789 No alias E3 ubiquitin ligase component *(Doa10) of ER-associated... 0.02 OrthoFinder output from all 47 species
Sam_g13534 No alias E3 ubiquitin ligase component *(Doa10) of ER-associated... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
InterPro domains Description Start Stop
IPR011016 Znf_RING-CH 23 69
No external refs found!