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  5. GSVIVT01022020001

GSVIVT01022020001 (ATG18H, ATATG18H)


Aliases : ATG18H, ATATG18H

Description : Vesicle trafficking.autophagosome formation.ATG9-2-18 membrane shuttling complex.ATG18 component


Gene families : OG0001998 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001998_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01022020001

Target Alias Description ECC score Gene Family Method Actions
AT1G03380 ATATG18G, ATG18G homolog of yeast autophagy 18 (ATG18) G 0.04 OrthoFinder output from all 47 species
Adi_g020040 ATATG18G, ATG18G component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.03 OrthoFinder output from all 47 species
Adi_g108203 ATG18H, ATATG18H component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.02 OrthoFinder output from all 47 species
Aev_g07963 ATATG18G, ATG18G component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.04 OrthoFinder output from all 47 species
Ala_g02641 ATG18H, ATATG18H component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.03 OrthoFinder output from all 47 species
Aop_g30972 ATG18H, ATATG18H component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.02 OrthoFinder output from all 47 species
Aspi01Gene70503.t1 ATATG18G,... component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.03 OrthoFinder output from all 47 species
Aspi01Gene70507.t1 ATATG18G,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_13732 ATATG18G, ATG18G component ATG18 of autophagosome ATG9-2-18 membrane... 0.02 OrthoFinder output from all 47 species
Gb_30474 ATATG18G, ATG18G component ATG18 of autophagosome ATG9-2-18 membrane... 0.03 OrthoFinder output from all 47 species
LOC_Os05g33610.1 ATATG18G,... component ATG18 of autophagosome ATG9-2-18 membrane... 0.03 OrthoFinder output from all 47 species
Len_g13072 ATATG18G, ATG18G component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.02 OrthoFinder output from all 47 species
Lfl_g02416 ATG18H, ATATG18H component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.04 OrthoFinder output from all 47 species
Mp3g05770.1 ATG18H, ATATG18H component ATG18 of autophagosome ATG9-2-18 membrane... 0.04 OrthoFinder output from all 47 species
Msp_g44414 ATATG18G, ATG18G component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.02 OrthoFinder output from all 47 species
Nbi_g02484 ATATG18G, ATG18G component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.02 OrthoFinder output from all 47 species
Ore_g37975 ATATG18G, ATG18G component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.02 OrthoFinder output from all 47 species
Ore_g45467 ATATG18G, ATG18G component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.02 OrthoFinder output from all 47 species
Pir_g18915 ATATG18G, ATG18G component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.03 OrthoFinder output from all 47 species
Pir_g25432 ATATG18G, ATG18G component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.03 OrthoFinder output from all 47 species
Smo442028 ATG18H, ATATG18H Vesicle trafficking.autophagosome formation.ATG9-2-18... 0.03 OrthoFinder output from all 47 species
Solyc01g098430.3.1 ATG18H,... component ATG18 of autophagosome ATG9-2-18 membrane... 0.02 OrthoFinder output from all 47 species
Solyc07g064060.3.1 ATATG18F, G18F,... component ATG18 of autophagosome ATG9-2-18 membrane... 0.05 OrthoFinder output from all 47 species
Spa_g09281 ATATG18G, ATG18G component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.02 OrthoFinder output from all 47 species
Spa_g18126 ATG18H, ATATG18H component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.02 OrthoFinder output from all 47 species
Tin_g04749 ATATG18G, ATG18G component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.04 OrthoFinder output from all 47 species
Zm00001e031636_P001 ATG18H,... component ATG18 of autophagosome ATG9-2-18 membrane... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
InterPro domains Description Start Stop
IPR022175 BCAS3 488 703
IPR001680 WD40_repeat 403 440
IPR001680 WD40_repeat 347 373
No external refs found!