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  5. GSVIVT01021896001

GSVIVT01021896001 (LRS1)


Aliases : LRS1

Description : Dynein assembly factor with WDR repeat domains 1 OS=Chlamydomonas reinhardtii


Gene families : OG0002511 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002511_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01021896001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00083820 LRS1,... Dynein assembly factor with WDR repeat domains 1... 0.03 OrthoFinder output from all 47 species
Aspi01Gene58195.t1 LRS1, Aspi01Gene58195 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene58196.t1 LRS1, Aspi01Gene58196 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Ceric.06G068400.1 LRS1, Ceric.06G068400 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.05 OrthoFinder output from all 47 species
Ceric.33G020800.1 LRS1, Ceric.33G020800 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Dac_g09416 LRS1 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Dac_g11508 LRS1 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Lfl_g10497 LRS1 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
MA_18695g0010 LRS1 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp6g09950.1 LRS1 Flagellar WD repeat-containing protein Pf20... 0.02 OrthoFinder output from all 47 species
Msp_g13261 LRS1 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Ore_g09811 LRS1 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.05 OrthoFinder output from all 47 species
Ppi_g01311 LRS1 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0088.g018560 LRS1 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Smo139346 LRS1 Dynein assembly factor with WDR repeat domains 1... 0.04 OrthoFinder output from all 47 species
Solyc01g098090.3.1 LRS1, Solyc01g098090 Dynein assembly factor with WDR repeat domains 1... 0.04 OrthoFinder output from all 47 species
Solyc08g023590.4.1 LRS1, Solyc08g023590 Coatomer subunit alpha-2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Tin_g02857 LRS1 substrate adaptor of CUL4-based E3 ubiquiTin ligase... 0.04 OrthoFinder output from all 47 species
Tin_g05212 LRS1 substrate adaptor of CUL4-based E3 ubiquiTin ligase... 0.04 OrthoFinder output from all 47 species
Zm00001e018453_P003 LRS1, Zm00001e018453 Dynein assembly factor with WDR repeat domains 1... 0.06 OrthoFinder output from all 47 species
Zm00001e039445_P001 LRS1, Zm00001e039445 Dynein assembly factor with WDR repeat domains 1... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0004652 polynucleotide adenylyltransferase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
BP GO:0016482 cytosolic transport IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
CC GO:0030906 retromer, cargo-selective complex IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0042147 retrograde transport, endosome to Golgi IEP HCCA
BP GO:0043631 RNA polyadenylation IEP HCCA
MF GO:0070566 adenylyltransferase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 75 111
IPR001680 WD40_repeat 116 155
IPR001680 WD40_repeat 215 246
IPR001680 WD40_repeat 252 288
IPR021772 WDR48/Bun107 614 776
No external refs found!