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  5. GSVIVT01021754001

GSVIVT01021754001 (LSH4)


Aliases : LSH4

Description : Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3 OS=Arabidopsis thaliana


Gene families : OG0001118 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001118_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01021754001

Target Alias Description ECC score Gene Family Method Actions
AT1G78815 LSH7 Protein of unknown function (DUF640) 0.03 OrthoFinder output from all 47 species
Als_g17249 LSH4 plant-specific ALOG-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0093.g043261 LSH4 plant-specific ALOG-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dde_g11211 LSH4 plant-specific ALOG-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
LOC_Os04g43580.2 LSH4, LOC_Os04g43580 Protein G1-like3 OS=Oryza sativa subsp. indica... 0.03 OrthoFinder output from all 47 species
LOC_Os05g39500.1 LSH6, LOC_Os05g39500 Protein G1-like8 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
Len_g03807 LSH1 plant-specific ALOG-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Mp2g00330.1 LSH4 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3... 0.05 OrthoFinder output from all 47 species
Ppi_g02051 LSH4 plant-specific ALOG-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ppi_g53162 LSH4 plant-specific ALOG-type transcription factor & original... 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0158.g023794 LSH4 plant-specific ALOG-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Smo36560 No alias Protein G1-like4 OS=Oryza sativa subsp. indica 0.02 OrthoFinder output from all 47 species
Solyc04g009980.4.1 LSH1, Solyc04g009980 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006936 ALOG_dom 138 180
IPR006936 ALOG_dom 85 138
No external refs found!