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  5. GSVIVT01021620001

GSVIVT01021620001


No description available


Gene families : OG0001489 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001489_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01021620001
Cluster HCCA: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00148p00040560 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT1G30470 No alias SIT4 phosphatase-associated family protein 0.03 OrthoFinder output from all 47 species
AT3G45190 No alias SIT4 phosphatase-associated family protein 0.03 OrthoFinder output from all 47 species
Adi_g056274 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g075656 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g080381 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g103682 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g23509 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15062 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g60684 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g61175 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g14590 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene10739.t1 Aspi01Gene10739 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0292.g063371 No alias not classified & original description: CDS=345-3257 0.04 OrthoFinder output from all 47 species
Cba_g11877 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.29G048200.1 Ceric.29G048200 not classified & original description: pacid=50625778... 0.07 OrthoFinder output from all 47 species
Cre12.g484150 No alias No description available 0.02 OrthoFinder output from all 47 species
Dac_g06841 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g11195 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g21510 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g40340.1 LOC_Os01g40340 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
LOC_Os05g51490.1 LOC_Os05g51490 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Len_g22543 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Lfl_g09902 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g21329 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06805 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g04434 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g19157 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g06487 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g39441 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g25157 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g52268 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo419685 No alias No description available 0.05 OrthoFinder output from all 47 species
Solyc06g011665.1.1 Solyc06g011665 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Solyc11g069490.3.1 Solyc11g069490 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Spa_g31041 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g03491 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e020549_P002 Zm00001e020549 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e027801_P001 Zm00001e027801 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e032567_P002 Zm00001e032567 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR007587 SAPS 351 484
IPR007587 SAPS 127 340
No external refs found!