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  5. GSVIVT01021589001

GSVIVT01021589001 (AtABCC2, ABCC2,...)


Aliases : AtABCC2, ABCC2, ATMRP2, EST4, MRP2

Description : Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCC transporter


Gene families : OG0000037 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01021589001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00090p00174380 ABCC3, ATMRP3,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
AMTR_s00090p00176020 ABCC3, ATMRP3,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
AMTR_s00092p00037330 AtABCC2, ABCC2,... Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
AT1G04120 ATABCC5, MRP5,... multidrug resistance-associated protein 5 0.03 OrthoFinder output from all 47 species
AT1G30420 ATMRP12, MRP12, ABCC11 multidrug resistance-associated protein 12 0.04 OrthoFinder output from all 47 species
Adi_g022454 ATABCC5, MRP5,... subfamily ABCC transporter & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g075794 MRP10, ATMRP10, ABCC14 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g08442 MRP10, ATMRP10, ABCC14 subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27922 AtABCC2, ABCC2,... glutathione S-conjugate transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene64348.t1 ABCC1, ATABCC1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene67415.t1 EST3, MRP4,... subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0007.g010546 EST3, MRP4, ATMRP4, ABCC4 subfamily ABCC transporter & original description: CDS=81-4649 0.02 OrthoFinder output from all 47 species
Azfi_s0013.g013359 ATABCC5, MRP5,... subfamily ABCC transporter & original description: CDS=377-4993 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001254.7 MRP15, ABCC15, ATMRP15 ABC transporter C family member 4 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dac_g05492 EST3, MRP4, ATMRP4, ABCC4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g18367 MRP10, ATMRP10, ABCC14 subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01028440001 ATABCC5, MRP5,... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Len_g10163 ABCC1, ATABCC1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g28425 ABCC1, ATABCC1,... subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Mp5g13230.1 MRP10, ATMRP10, ABCC14 subfamily ABCC transporter 0.02 OrthoFinder output from all 47 species
Ore_g20671 MRP10, ATMRP10, ABCC14 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0192.g025351 MRP10, ATMRP10, ABCC14 subfamily ABCC transporter & original description: CDS=562-5160 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0212.g025945 MRP6, ATMRP6, ABCC8 subfamily ABCC transporter & original description: CDS=1-3888 0.03 OrthoFinder output from all 47 species
Sam_g27892 No alias subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Smo267218 ATMRP14, ABCC10, MRP14 Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Smo81581 AtABCC2, ABCC2,... Solute transport.primary active transport.ABC... 0.05 OrthoFinder output from all 47 species
Solyc08g006880.3.1 AtABCC2, ABCC2,... subfamily ABCC transporter 0.04 OrthoFinder output from all 47 species
Solyc12g044820.3.1 MRP6, ATMRP6,... subfamily ABCC transporter 0.02 OrthoFinder output from all 47 species
Spa_g12853 ATABCC5, MRP5,... subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g10300 EST3, MRP4, ATMRP4, ABCC4 subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e026288_P002 MRP10, ATMRP10,... subfamily ABCC transporter 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0003968 RNA-dependent RNA polymerase activity IEP HCCA
MF GO:0004565 beta-galactosidase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
CC GO:0009341 beta-galactosidase complex IEP HCCA
MF GO:0015925 galactosidase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0046903 secretion IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 1256 1404
IPR011527 ABC1_TM_dom 918 1164
IPR011527 ABC1_TM_dom 307 571
IPR003439 ABC_transporter-like_ATP-bd 633 768
No external refs found!