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Aliases : ARF6
Description : RNA biosynthesis.transcriptional activation.B3 superfamily.ARF transcription factor
Gene families : OG0000088 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000088_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00021p00221770 | ARF1,... | RNA biosynthesis.transcriptional activation.B3... | 0.02 | OrthoFinder output from all 47 species | |
| AT1G35240 | ARF20 | auxin response factor 20 | 0.03 | OrthoFinder output from all 47 species | |
| AT1G59750 | ARF1 | auxin response factor 1 | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g024483 | ARF19, IAA22, ARF11 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g054964 | ARF16 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g075709 | ARF6 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g080414 | ARF19, IAA22, ARF11 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g14726 | ARF6 | ARF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0019.g015120 | ARF10 | ARF-type transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0038.g026103 | ARF6 | ARF-type transcription factor & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0697.g082598 | ARF16 | ARF-type transcription factor & original description: CDS=1-2376 | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.29G070000.1 | ARF6, Ceric.29G070000 | ARF-type transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g31924 | ARF1 | ARF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g15200 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Gb_23186 | HSS, ARF1-BP, ARF2, ORE14 | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
| Gb_32404 | ARF4 | transcription factor (ARF) | 0.06 | OrthoFinder output from all 47 species | |
| Gb_39686 | ARF6 | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g13520.1 | ARF11, LOC_Os01g13520 | transcription factor (ARF) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os01g70270.1 | HSS, ARF1-BP,... | transcription factor (ARF) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os04g57610.1 | ARF8, ATARF8,... | transcription factor (ARF) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os11g32110.1 | HSS, ARF1-BP,... | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os12g29520.1 | HSS, ARF1-BP,... | transcription factor (ARF) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os12g41950.1 | ARF6, LOC_Os12g41950 | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
| MA_10432580g0010 | HSS, ARF1-BP, ARF2, ORE14 | transcription factor (ARF) | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g30357 | ARF16 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g41869 | ARF17 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g49817 | No alias | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc02g037530.3.1 | ARF8, ATARF8,... | transcription factor (ARF) | 0.06 | OrthoFinder output from all 47 species | |
| Solyc03g031970.4.1 | ARF8, ATARF8,... | transcription factor (ARF) | 0.05 | OrthoFinder output from all 47 species | |
| Solyc05g047460.3.1 | ARF19, IAA22,... | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e003229_P002 | ARF6, Zm00001e003229 | transcription factor (ARF) | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e006640_P002 | MP, IAA24, ARF5,... | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e015164_P002 | ARF10, Zm00001e015164 | transcription factor (ARF) | 0.07 | OrthoFinder output from all 47 species | |
| Zm00001e018126_P002 | ARF6, Zm00001e018126 | transcription factor (ARF) | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e020205_P004 | ARF3, ETT, Zm00001e020205 | transcription factor (ARF) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e028396_P001 | HSS, ARF1-BP,... | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008134 | transcription factor binding | IEP | HCCA |
| MF | GO:0017025 | TBP-class protein binding | IEP | HCCA |
| MF | GO:0140296 | general transcription initiation factor binding | IEP | HCCA |
| No external refs found! |