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Aliases : ARF6
Description : RNA biosynthesis.transcriptional activation.B3 superfamily.ARF transcription factor
Gene families : OG0000088 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000088_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00007p00267580 | ARF19, IAA22,... | RNA biosynthesis.transcriptional activation.B3... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00029p00157690 | ARF6,... | RNA biosynthesis.transcriptional activation.B3... | 0.04 | OrthoFinder output from all 47 species | |
| AT1G19850 | MP, IAA24, ARF5 | Transcriptional factor B3 family protein /... | 0.03 | OrthoFinder output from all 47 species | |
| AT2G33860 | ARF3, ETT | Transcriptional factor B3 family protein /... | 0.06 | OrthoFinder output from all 47 species | |
| AT5G37020 | ARF8, ATARF8 | auxin response factor 8 | 0.06 | OrthoFinder output from all 47 species | |
| AT5G60450 | ARF4 | auxin response factor 4 | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g014286 | ARF4 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g054964 | ARF16 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g057044 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g103007 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g11014 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g14726 | ARF6 | ARF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g33060 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g22075 | ARF6 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g12700 | ARF6 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g21442 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0011.g012740 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: CDS=1-2724 | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0013.g013413 | ARF10 | ARF-type transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0384.g067487 | ARF8, ATARF8 | ARF-type transcription factor & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g07702 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g11427 | ARF6 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.30G022300.1 | ARF6, Ceric.30G022300 | ARF-type transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.35G054000.1 | ARF6, Ceric.35G054000 | ARF-type transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g05781 | ARF6 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g11626 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g14113 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g18587 | ARF16 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g20778 | ARF14 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01011008001 | HSS, ARF1-BP, ARF2, ORE14 | RNA biosynthesis.transcriptional activation.B3... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01025198001 | ARF10 | RNA biosynthesis.transcriptional activation.B3... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_39685 | ARF6 | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
| Gb_39686 | ARF6 | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g48060.1 | ARF3, ETT, LOC_Os01g48060 | transcription factor (ARF) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os04g36054.1 | ARF1, LOC_Os04g36054 | transcription factor (ARF) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os04g56850.1 | MP, IAA24, ARF5,... | transcription factor (ARF) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os05g43920.1 | ARF3, ETT, LOC_Os05g43920 | transcription factor (ARF) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os05g48870.1 | ARF3, ETT, LOC_Os05g48870 | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
| Len_g01404 | ARF6 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_10432580g0010 | HSS, ARF1-BP, ARF2, ORE14 | transcription factor (ARF) | 0.04 | OrthoFinder output from all 47 species | |
| Mp1g12750.1 | ARF6 | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g14175 | ARF6 | ARF-type transcription factor & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0004.g002378 | ARF1 | ARF-type transcription factor & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0024.g008995 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description:... | 0.05 | OrthoFinder output from all 47 species | |
| Sam_g49817 | No alias | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g096070.3.1 | ARF9, Solyc01g096070 | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g037530.3.1 | ARF8, ATARF8,... | transcription factor (ARF) | 0.06 | OrthoFinder output from all 47 species | |
| Solyc02g077560.3.1 | ARF3, ETT, Solyc02g077560 | transcription factor (ARF) | 0.06 | OrthoFinder output from all 47 species | |
| Solyc03g118290.3.1 | HSS, ARF1-BP,... | transcription factor (ARF) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc05g047460.3.1 | ARF19, IAA22,... | transcription factor (ARF) | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g29254 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g27871 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e003229_P002 | ARF6, Zm00001e003229 | transcription factor (ARF) | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e003591_P003 | ARF19, IAA22,... | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e006577_P003 | ARF8, ATARF8,... | transcription factor (ARF) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e006640_P002 | MP, IAA24, ARF5,... | transcription factor (ARF) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e014833_P002 | ARF1, Zm00001e014833 | transcription factor (ARF) | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e016366_P002 | ARF11, Zm00001e016366 | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e018126_P002 | ARF6, Zm00001e018126 | transcription factor (ARF) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e021527_P006 | HSS, ARF1-BP,... | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e028396_P001 | HSS, ARF1-BP,... | transcription factor (ARF) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e030325_P003 | ARF6, Zm00001e030325 | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e041910_P003 | ARF8, ATARF8,... | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004672 | protein kinase activity | IEP | HCCA |
| BP | GO:0006468 | protein phosphorylation | IEP | HCCA |
| BP | GO:0006793 | phosphorus metabolic process | IEP | HCCA |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | HCCA |
| MF | GO:0008134 | transcription factor binding | IEP | HCCA |
| MF | GO:0016301 | kinase activity | IEP | HCCA |
| BP | GO:0016310 | phosphorylation | IEP | HCCA |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | HCCA |
| MF | GO:0017025 | TBP-class protein binding | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| BP | GO:0036211 | protein modification process | IEP | HCCA |
| BP | GO:0043412 | macromolecule modification | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
| MF | GO:0140296 | general transcription initiation factor binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR033389 | AUX/IAA_dom | 73 | 116 |
| No external refs found! |