GSVIVT01021403001


Description : Pentatricopeptide repeat-containing protein At3g14730 OS=Arabidopsis thaliana


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01021403001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00259690 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g46460,... 0.02 OrthoFinder output from all 47 species
AMTR_s00022p00252600 MEF1 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
AMTR_s00029p00230160 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species
AMTR_s00058p00187000 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g33760... 0.05 OrthoFinder output from all 47 species
Adi_g003764 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g003861 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g004398 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g004477 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g004502 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g005695 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g005702 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g006593 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g011101 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g021650 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g023835 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g033266 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g033552 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g034364 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g034832 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g034933 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g036805 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g036834 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g036845 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g049631 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g056226 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g058519 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g059864 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g060956 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g066055 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g067033 CRR21 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g067968 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g074266 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g077235 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g078577 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g080049 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g087234 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g095461 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g097074 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g098996 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g099087 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g099166 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g101230 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g104165 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g01931 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12452 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13016 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g20117 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g31177 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g33569 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g35746 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36211 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36508 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03141 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06398 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06415 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07035 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07386 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g10215 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26513 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g06487 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g26953 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27221 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27610 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g28205 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g42240 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03841 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g04175 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g07339 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene01906.t1 Aspi01Gene01906 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene10286.t1 Aspi01Gene10286 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene67429.t1 Aspi01Gene67429 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0006.g010197 OTP82 not classified & original description: CDS=163-897 0.04 OrthoFinder output from all 47 species
Azfi_s0027.g023505 No alias not classified & original description: CDS=32-2620 0.09 OrthoFinder output from all 47 species
Azfi_s0573.g078051 No alias not classified & original description: CDS=1-1146 0.03 OrthoFinder output from all 47 species
Azfi_s1721.g106131 No alias not classified & original description: CDS=1-2793 0.05 OrthoFinder output from all 47 species
Cba_g03281 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05935 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07022 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15519 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g29359 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g37478 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g04271 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g14062 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g16704 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g30165 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g35260 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g42997 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g43242 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g05761 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g07044 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08908 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g11455 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g04879 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g08678 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g13626 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g16094 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16374 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16413 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g16485 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g17698 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g19140 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g19625 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g20970 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g22172 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g22727 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g22836 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23651 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24220 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g24744 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g26041 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26357 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g28518 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g31261 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g34076 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g36054 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g36830 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g38179 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g40646 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g41697 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g46554 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g46627 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g50097 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g50249 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g21772 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g23273 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_25046 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Len_g03869 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g04823 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g08566 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g18191 OTP86 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18287 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18597 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18961 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g24653 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g26299 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g26572 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g33480 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g33754 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g34131 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g36740 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g44785 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g44786 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g44791 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g47306 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g54307 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g54663 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g54958 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g55833 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g03987 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g05012 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g05604 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07288 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g32854 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g33290 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g33303 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g33305 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g39111 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g04488 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g06496 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g07530 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g11907 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g14058 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g14104 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g15230 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g26631 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g43136 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g44842 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g45692 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g10208 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g20343 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g21358 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g21858 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g40774 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g29911 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g32824 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g35403 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g11747 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g28912 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63491 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63501 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g64428 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g66077 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g03120 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g12889 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g19353 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g22615 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g23595 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30639 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g30641 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03998 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04704 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g05345 EMB2261 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06960 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07564 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g12921 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g16324 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g22081 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g33539 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g42752 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g44704 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g53019 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53359 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53728 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g59316 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59344 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g59345 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g63607 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0016.g006801 EMB2261 not classified & original description: CDS=90-2282 0.02 OrthoFinder output from all 47 species
Sam_g15563 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g25339 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29293 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo99677 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
Spa_g08133 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g11567 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g15468 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g20189 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g23544 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g51341 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g53279 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10948 MEF22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g17464 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g20961 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g21829 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g23270 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g30039 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 103 149
IPR002885 Pentatricopeptide_repeat 201 247
IPR002885 Pentatricopeptide_repeat 408 456
IPR002885 Pentatricopeptide_repeat 483 503
IPR002885 Pentatricopeptide_repeat 304 334
IPR002885 Pentatricopeptide_repeat 76 96
IPR002885 Pentatricopeptide_repeat 276 303
IPR002885 Pentatricopeptide_repeat 549 577
IPR032867 DYW_dom 582 629
No external refs found!