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Aliases : ATPUB17, PUB17
Description : U-box domain-containing protein 17 OS=Arabidopsis thaliana
Gene families : OG0000092 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000092_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00001p00030110 | PUB15,... | U-box domain-containing protein 15 OS=Arabidopsis thaliana | 0.05 | OrthoFinder output from all 47 species | |
| AMTR_s00006p00267930 | evm_27.TU.AmTr_v1... | U-box domain-containing protein 19 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00007p00217990 | evm_27.TU.AmTr_v1... | U-box domain-containing protein 16 OS=Arabidopsis thaliana | 0.05 | OrthoFinder output from all 47 species | |
| AMTR_s00072p00171260 | PUB14, ATPUB14,... | Protein degradation.peptide tagging.Ubiquitin... | 0.06 | OrthoFinder output from all 47 species | |
| AMTR_s00086p00031680 | evm_27.TU.AmTr_v1... | U-box domain-containing protein 4 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00153p00035720 | ATPUB17, PUB17,... | U-box domain-containing protein 1 OS=Medicago truncatula | 0.03 | OrthoFinder output from all 47 species | |
| AT1G23030 | No alias | ARM repeat superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT1G29340 | ATPUB17, PUB17 | plant U-box 17 | 0.08 | OrthoFinder output from all 47 species | |
| AT1G60190 | No alias | ARM repeat superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT3G46510 | PUB13, ATPUB13 | plant U-box 13 | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g009234 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g017517 | ATPUB17, PUB17 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g019046 | ATPUB17, PUB17 | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g054040 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g080188 | ATPUB17, PUB17 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g04770 | PUB8, B80 | E3 ubiquitin ligase *(PUB8) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g05159 | PUB12, AtPUB12 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g05257 | PUB8, B80 | E3 ubiquitin ligase *(PUB8) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g07263 | PUB13, ATPUB13 | E3 ubiquitin ligase *(PUB15) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g09883 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g07408 | ATPUB17, PUB17 | E3 ubiquitin ligase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g08869 | PUB15 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Als_g03799 | ATPUB17, PUB17 | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Als_g07222 | PUB8, B80 | E3 ubiquitin ligase *(PUB8) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g16049 | ATPUB17, PUB17 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g16594 | PUB14, ATPUB14 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Als_g26320 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g01685 | PUB8, B80 | E3 ubiquitin ligase *(PUB8) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g17483 | PUB15 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g00484 | PUB8, B80 | E3 ubiquitin ligase *(PUB8) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g01345 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g19192 | ATPUB17, PUB17 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g19819 | ATPUB17, PUB17 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g60695 | ATPUB17, PUB17 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene01377.t1 | PUB14, ATPUB14,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene36179.t1 | Aspi01Gene36179 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene36187.t1 | ATPUB17, PUB17,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene43158.t1 | ATPUB17, PUB17,... | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene44181.t1 | ATPUB17, PUB17,... | E3 ubiquitin ligase & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aspi01Gene44182.t1 | ATPUB17, PUB17,... | E3 ubiquitin ligase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene44183.t1 | ATPUB17, PUB17,... | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene44184.t1 | ATPUB17, PUB17,... | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene44185.t1 | ATPUB17, PUB17,... | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene44188.t1 | Aspi01Gene44188 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene65975.t1 | PUB8, B80,... | E3 ubiquitin ligase *(PUB8) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0001.g000295 | No alias | not classified & original description: CDS=1-2304 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0292.g063403 | No alias | not classified & original description: CDS=1-2253 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s2299.g110335 | PUB14, ATPUB14 | not classified & original description: CDS=293-1597 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g04504 | ATPUB17, PUB17 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g43903 | No alias | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.10G010300.1 | ATPUB17, PUB17,... | not classified & original description: pacid=50611933... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.13G074400.1 | ATPUB17, PUB17,... | E3 ubiquitin ligase & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.26G012900.1 | Ceric.26G012900 | not classified & original description: pacid=50598948... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.34G042900.1 | PUB13, ATPUB13,... | not classified & original description: pacid=50623547... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.35G012000.1 | PUB13, ATPUB13,... | E3 ubiquitin ligase & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g02154 | PUB8, B80 | E3 ubiquitin ligase *(PUB8) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g08066 | ATPUB17, PUB17 | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Dac_g12067 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g12068 | No alias | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g13651 | No alias | E3 ubiquitin ligase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g35890 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g40757 | ATPUB17, PUB17 | E3 ubiquitin ligase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g07071 | PUB13, ATPUB13 | E3 ubiquitin ligase *(PUB15) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g02654 | No alias | E3 ubiquitin ligase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g02800 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g06164 | ATPUB17, PUB17 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g06975 | ATPUB17, PUB17 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g13215 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g18007 | ATPUB17, PUB17 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g22153 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g29208 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01032778001 | ATPUB17, PUB17 | U-box domain-containing protein 1 OS=Medicago truncatula | 0.03 | OrthoFinder output from all 47 species | |
| Gb_10627 | PUB8, B80 | U-box domain-containing protein 13 OS=Arabidopsis... | 0.07 | OrthoFinder output from all 47 species | |
| Gb_12875 | PUB13, ATPUB13 | E3 ubiquitin ligase (PUB) | 0.03 | OrthoFinder output from all 47 species | |
| Gb_29129 | ATPUB17, PUB17 | U-box domain-containing protein 1 OS=Medicago truncatula... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_29276 | ATPUB17, PUB17 | E3 ubiquitin ligase (PUB) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os01g60860.1 | LOC_Os01g60860 | U-box domain-containing protein 16 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os01g72600.1 | LOC_Os01g72600 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g28720.1 | PUB9, ATPUB9,... | E3 ubiquitin ligase (PUB) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g49950.1 | LOC_Os02g49950 | E3 ubiquitin ligase (PUB) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g16824.1 | PUB13, ATPUB13,... | E3 ubiquitin ligase (PUB) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os05g39930.1 | LOC_Os05g39930 | U-box domain-containing protein 16 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os06g01304.1 | PUB14, ATPUB14,... | E3 ubiquitin ligase (PUB) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os06g51130.1 | PUB15, LOC_Os06g51130 | U-box domain-containing protein 15 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os08g37570.1 | PUB15, LOC_Os08g37570 | U-box domain-containing protein 15 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| Len_g03070 | ATPUB17, PUB17 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g08149 | ATPUB17, PUB17 | E3 ubiquitin ligase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g08985 | ATPUB17, PUB17 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g09306 | PUB13, ATPUB13 | E3 ubiquitin ligase *(PUB15) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g14585 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_10431467g0020 | ATPUB17, PUB17 | U-box domain-containing protein 1 OS=Medicago truncatula... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g01206 | ATPUB17, PUB17 | E3 ubiquitin ligase & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Msp_g16068 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g31758 | PUB8, B80 | E3 ubiquitin ligase *(PUB8) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g03120 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g07136 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g05165 | ATPUB17, PUB17 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g15817 | PUB8, B80 | E3 ubiquitin ligase *(PUB8) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g25617 | ATPUB17, PUB17 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g28240 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g39748 | PUB13, ATPUB13 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g12553 | No alias | E3 ubiquitin ligase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g02760 | PUB8, B80 | E3 ubiquitin ligase *(PUB8) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g03502 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g16189 | PUB12, AtPUB12 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g17953 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g26171 | ATPUB17, PUB17 | E3 ubiquitin ligase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g06266 | PUB14, ATPUB14 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g06418 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g17363 | ATPUB17, PUB17 | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0007.g003607 | ATPUB17, PUB17 | not classified & original description: CDS=1-2595 | 0.04 | OrthoFinder output from all 47 species | |
| Solyc01g096460.2.1 | Solyc01g096460 | U-box domain-containing protein 4 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g072080.1.1 | ATPUB17, PUB17,... | U-box domain-containing protein 17 OS=Arabidopsis... | 0.09 | OrthoFinder output from all 47 species | |
| Solyc02g079740.1.1 | PUB8, B80, Solyc02g079740 | U-box domain-containing protein 8 OS=Arabidopsis... | 0.01 | OrthoFinder output from all 47 species | |
| Solyc03g114160.1.1 | Solyc03g114160 | E3 ubiquitin ligase (PUB) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc04g077850.3.1 | Solyc04g077850 | U-box domain-containing protein 4 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc04g082440.4.1 | PUB15, Solyc04g082440 | U-box domain-containing protein 15 OS=Arabidopsis... | 0.06 | OrthoFinder output from all 47 species | |
| Solyc06g076040.3.1 | PUB13, ATPUB13,... | E3 ubiquitin ligase (PUB) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc09g056450.4.1 | PUB9, ATPUB9,... | U-box domain-containing protein 9 OS=Arabidopsis... | 0.13 | OrthoFinder output from all 47 species | |
| Solyc11g008390.2.1 | PUB14, ATPUB14,... | E3 ubiquitin ligase (PUB) | 0.05 | OrthoFinder output from all 47 species | |
| Solyc12g088360.2.1 | Solyc12g088360 | U-box domain-containing protein 4 OS=Arabidopsis... | 0.07 | OrthoFinder output from all 47 species | |
| Solyc12g094610.3.1 | PUB15, Solyc12g094610 | U-box domain-containing protein 15 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g05552 | ATPUB17, PUB17 | E3 ubiquitin ligase & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Spa_g07392 | PUB15 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g11468 | PUB14, ATPUB14 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g25117 | PUB14, ATPUB14 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g01104 | No alias | E3 ubiquiTin ligase & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Tin_g02458 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g07352 | ATPUB17, PUB17 | E3 ubiquiTin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g14575 | PUB18, ATPUB18 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g15274 | PUB13, ATPUB13 | E3 ubiquiTin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g21993 | PUB13, ATPUB13 | E3 ubiquiTin ligase *(PUB15) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e002954_P001 | PUB13, ATPUB13,... | E3 ubiquitin ligase (PUB) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e003398_P001 | PUB15, Zm00001e003398 | U-box domain-containing protein 15 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e014566_P002 | PUB9, ATPUB9,... | E3 ubiquitin ligase (PUB) | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e018578_P001 | Zm00001e018578 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e019429_P001 | Zm00001e019429 | U-box domain-containing protein 16 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e028839_P001 | Zm00001e028839 | U-box domain-containing protein 16 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e031915_P001 | Zm00001e031915 | U-box domain-containing protein 16 OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e035415_P001 | Zm00001e035415 | U-box domain-containing protein 4 OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| BP | GO:0006631 | fatty acid metabolic process | IEP | HCCA |
| BP | GO:0006633 | fatty acid biosynthetic process | IEP | HCCA |
| BP | GO:0010215 | cellulose microfibril organization | IEP | HCCA |
| BP | GO:0016049 | cell growth | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| MF | GO:0016759 | cellulose synthase activity | IEP | HCCA |
| MF | GO:0016760 | cellulose synthase (UDP-forming) activity | IEP | HCCA |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
| BP | GO:0030198 | extracellular matrix organization | IEP | HCCA |
| BP | GO:0030243 | cellulose metabolic process | IEP | HCCA |
| BP | GO:0030244 | cellulose biosynthetic process | IEP | HCCA |
| CC | GO:0031225 | obsolete anchored component of membrane | IEP | HCCA |
| BP | GO:0040007 | growth | IEP | HCCA |
| BP | GO:0043062 | extracellular structure organization | IEP | HCCA |
| BP | GO:0045229 | external encapsulating structure organization | IEP | HCCA |
| BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | HCCA |
| MF | GO:0061630 | ubiquitin protein ligase activity | IEP | HCCA |
| MF | GO:0061659 | ubiquitin-like protein ligase activity | IEP | HCCA |
| BP | GO:0072330 | monocarboxylic acid biosynthetic process | IEP | HCCA |
| No external refs found! |