GSVIVT01021253001 (ATHSGBP, RABA1d,...)

Aliases : ATHSGBP, RABA1d, ATRABA1D, ATRAB11B

Description : Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase activities.A-class RAB GTPase

Gene families : OG0000247 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000247_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01021253001

Target	Alias	Description	ECC score	Gene Family Method
Aev_g04605	AtRABA1f, RABA1f	A-class RAB GTPase & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g17596	ATRABA5C, ARA4,...	A-class RAB GTPase & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g18147	AtRABA1f, RABA1f	A-class RAB GTPase & original description: none	0.04	OrthoFinder output from all 47 species
Aev_g31350	AtRABA1f, RABA1f	A-class RAB GTPase & original description: none	0.05	OrthoFinder output from all 47 species
Als_g08482	AtRABA1f, RABA1f	A-class RAB GTPase & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g20651	AtRABA1f, RABA1f	A-class RAB GTPase & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g01612	RABA2b,...	A-class RAB GTPase & original description: none	0.05	OrthoFinder output from all 47 species
Aop_g42193	AtRABA1f, RABA1f	A-class RAB GTPase & original description: none	0.04	OrthoFinder output from all 47 species
Cba_g09606	AtRABA1f, RABA1f	A-class RAB GTPase & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.32G031600.1	ATRABA5C, ARA4,...	A-class RAB GTPase & original description:...	0.04	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020961.97	AtRABA1e, RABA1e	Vesicle trafficking.regulation of membrane tethering and...	0.01	OrthoFinder output from all 47 species
Cre03.g189250	ATRABA2A,...	Vesicle trafficking.regulation of membrane tethering and...	0.04	OrthoFinder output from all 47 species
Dac_g27746	ARA-1, ATRABA5E,...	A-class RAB GTPase & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g03700	ARA-1, ATRABA5E,...	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Dcu_g08021	AtRABA1f, RABA1f	A-class RAB GTPase & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g40522	ATRABA2A,...	A-class RAB GTPase & original description: none	0.06	OrthoFinder output from all 47 species
Dde_g03286	AtRABA1f, RABA1f	A-class RAB GTPase & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g00471	ATRABA5C, ARA4,...	A-class RAB GTPase & original description: none	0.04	OrthoFinder output from all 47 species
LOC_Os05g01480.1	ATRABA2A,...	A-class RAB GTPase	0.03	OrthoFinder output from all 47 species
LOC_Os05g20050.1	RAB-A2C,...	A-class RAB GTPase	0.04	OrthoFinder output from all 47 species
LOC_Os05g44070.1	ATRABA1B, RAB11,...	A-class RAB GTPase	0.03	OrthoFinder output from all 47 species
LOC_Os06g35814.1	ATHSGBP, RABA1d,...	A-class RAB GTPase	0.03	OrthoFinder output from all 47 species
LOC_Os08g41340.1	AtRABA5d,...	A-class RAB GTPase	0.05	OrthoFinder output from all 47 species
Len_g03672	AtRABA1f, RABA1f	A-class RAB GTPase & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g18286	AtRABA5d, RABA5d	A-class RAB GTPase & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g15644	AtRABA1f, RABA1f	A-class RAB GTPase & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g39855	ARA-1, ATRABA5E,...	A-class RAB GTPase & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g15033	AtRABA1f, RABA1f	A-class RAB GTPase & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g15960	AtRABA5b, RABA5b	A-class RAB GTPase & original description: none	0.02	OrthoFinder output from all 47 species
Smo146310	AtRABA1f, RABA1f	Vesicle trafficking.regulation of membrane tethering and...	0.03	OrthoFinder output from all 47 species
Solyc10g045550.2.1	ATRABA2A,...	A-class RAB GTPase	0.03	OrthoFinder output from all 47 species
Spa_g14805	AtRABA5d, RABA5d	A-class RAB GTPase & original description: none	0.07	OrthoFinder output from all 47 species
Tin_g27440	ATRABA5C, ARA4,...	A-class RAB GTPase & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e031368_P002	RAB-A2C,...	A-class RAB GTPase	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001806	Small_GTPase	15	138

External Links

No external refs found!

GSVIVT01021253001 (ATHSGBP, RABA1d,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation