GSVIVT01021184001 (PDC2)

Aliases : PDC2

Description : Carbohydrate metabolism.fermentation.alcoholic fermentation.pyruvate decarboxylase

Gene families : OG0001402 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001402_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01021184001
Cluster	HCCA: Cluster_111

Target	Alias	Description	ECC score	Gene Family Method
AT4G33070	No alias	Thiamine pyrophosphate dependent pyruvate decarboxylase...	0.05	OrthoFinder output from all 47 species
Adi_g004518	PDC2	EC_4.1 carbon-carbon lyase & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g10131	PDC2	EC_4.1 carbon-carbon lyase & original description: none	0.04	OrthoFinder output from all 47 species
LOC_Os03g18220.1	LOC_Os03g18220	pyruvate decarboxylase	0.05	OrthoFinder output from all 47 species
LOC_Os05g39310.1	LOC_Os05g39310	pyruvate decarboxylase	0.03	OrthoFinder output from all 47 species
Ppi_g16757	PDC2	EC_4.1 carbon-carbon lyase & original description: none	0.02	OrthoFinder output from all 47 species
Solyc10g076510.2.1	Solyc10g076510	pyruvate decarboxylase	0.08	OrthoFinder output from all 47 species
Zm00001e001325_P003	Zm00001e001325	pyruvate decarboxylase	0.08	OrthoFinder output from all 47 species
Zm00001e027278_P002	Zm00001e027278	pyruvate decarboxylase	0.09	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0019842	vitamin binding	None	Extended
MF	GO:0030976	thiamine pyrophosphate binding	IEA	Interproscan
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0050997	quaternary ammonium group binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
MF	GO:1901681	sulfur compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0008324	monoatomic cation transmembrane transporter activity	IEP	HCCA
MF	GO:0022890	inorganic cation transmembrane transporter activity	IEP	HCCA
BP	GO:0030001	metal ion transport	IEP	HCCA
MF	GO:0046873	metal ion transmembrane transporter activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR012000	Thiamin_PyroP_enz_cen_dom	213	330
IPR011766	TPP_enzyme_TPP-bd	423	548
IPR012001	Thiamin_PyroP_enz_TPP-bd_dom	16	183

External Links

No external refs found!