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  5. GSVIVT01021164001

GSVIVT01021164001


Description : Solute transport.carrier-mediated transport.CDF superfamily.CaCA family.cation exchanger (NCL/EF-CAX-type)


Gene families : OG0000757 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000757_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01021164001

Target Alias Description ECC score Gene Family Method Actions
AT1G29020 No alias Calcium-binding EF-hand family protein 0.05 OrthoFinder output from all 47 species
AT1G29025 No alias Calcium-binding EF-hand family protein 0.05 OrthoFinder output from all 47 species
AT2G34020 No alias Calcium-binding EF-hand family protein 0.03 OrthoFinder output from all 47 species
Ala_g21646 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g16002 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene07327.t2 Aspi01Gene07327 cation exchanger *(NCL/EF-CAX) & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene07409.t1 Aspi01Gene07409 cation exchanger *(NCL/EF-CAX) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34998.t1 Aspi01Gene34998 cation exchanger *(NCL/EF-CAX) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g51228 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g37123 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01020661001 No alias Solute transport.carrier-mediated transport.CDF... 0.04 OrthoFinder output from all 47 species
LOC_Os01g11414.1 LOC_Os01g11414 cation exchanger (NCL/EF-CAX) 0.03 OrthoFinder output from all 47 species
LOC_Os02g14980.1 LOC_Os02g14980 cation exchanger (NCL/EF-CAX) 0.03 OrthoFinder output from all 47 species
Len_g34847 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.03 OrthoFinder output from all 47 species
MA_104140g0010 No alias cation exchanger (NCL/EF-CAX) 0.03 OrthoFinder output from all 47 species
Mp5g15300.1 No alias cation exchanger (NCL/EF-CAX) 0.07 OrthoFinder output from all 47 species
Mp5g15310.1 No alias cation exchanger (NCL/EF-CAX) 0.04 OrthoFinder output from all 47 species
Mp8g02300.1 No alias cation exchanger (NCL/EF-CAX) 0.03 OrthoFinder output from all 47 species
Mp8g02310.1 No alias cation exchanger (NCL/EF-CAX) 0.03 OrthoFinder output from all 47 species
Mp8g02320.1 No alias cation exchanger (NCL/EF-CAX) 0.02 OrthoFinder output from all 47 species
Pir_g26323 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g12151 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g59906 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 284 348
IPR004837 NaCa_Exmemb 407 550
IPR004837 NaCa_Exmemb 72 250
No external refs found!