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  5. GSVIVT01020994001

GSVIVT01020994001 (RIN4)


Aliases : RIN4

Description : External stimuli response.biotic stress.pathogen effector.ETI (effector-triggered immunity) network.RIN4-RPM1 immune signalling.RIN4 RPM1-interacting factor


Gene families : OG0000509 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000509_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01020994001

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene39330.t1 Aspi01Gene39330 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene51468.t1 RIN4, Aspi01Gene51468 regulatory factor *(RIN4) guarded by RPM1/RPS2... 0.01 OrthoFinder output from all 47 species
Azfi_s0111.g045667 RIN4 not classified & original description: CDS=218-763 0.03 OrthoFinder output from all 47 species
Len_g17079 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g44629 RIN4 regulatory factor *(RIN4) guarded by RPM1/RPS2... 0.02 OrthoFinder output from all 47 species
Sam_g16131 No alias regulatory factor *(RIN4) guarded by RPM1/RPS2... 0.02 OrthoFinder output from all 47 species
Sam_g40068 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g51120 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc06g083390.4.1 RIN4, Solyc06g083390 RIN4 effector-triggered immunity RPM1-interacting factor 0.01 OrthoFinder output from all 47 species
Solyc09g059430.3.1 RIN4, Solyc09g059430 RIN4 effector-triggered immunity RPM1-interacting factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR008700 TypeIII_avirulence_cleave 146 181
No external refs found!