LOC_Os12g09290 (Os12g0194800)


Aliases : Os12g0194800

Description : 29.1.30 protein.aa activation.pseudouridylate synthase Pseudouridine synthase family protein


Gene families : OG_01_0005764 (Gene family) Phylogenetic Tree(s): OG0005764_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os12g09290
Cluster HCCA cluster: Cluster_283

Target Alias Description ECC score Gene Family Method Actions
AT1G09800 No alias Pseudouridine synthase family protein 0.02 Gene family
Cre09.g405150 No alias 29.1.30 protein.aa activation.pseudouridylate synthase... 0.02 Gene family
Smo231248 PACid_15415295 No description available 0.01 Gene family
Solyc01g103560.3.1 Solyc01g103560.3 29.1.30 protein.aa activation.pseudouridylate synthase... 0.05 Gene family

Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEA InterProScan
MF GO:0003723 RNA binding IEA InterProScan
BP GO:0009451 RNA modification IEA InterProScan
MF GO:0009982 pseudouridine synthase activity IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR020097 PsdUridine_synth_TruA_a/b_dom 76 186
IPR020097 PsdUridine_synth_TruA_a/b_dom 227 388
No external refs found!